Amaranthus tricolor (tampala): 130806341
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Entry
130806341 CDS
T09367
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130806341
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atri04121
]
130806341
Enzymes [BR:
atri01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130806341
Ubiquitin system [BR:
atri04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
130806341
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
FAIM1
DUF7567
Motif
Other DBs
NCBI-GeneID:
130806341
NCBI-ProteinID:
XP_057527353
LinkDB
All DBs
Position
2:complement(5223930..5230319)
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AA seq
321 aa
AA seq
DB search
MDIDSIECVSSVDGLEEEEIPHLDNHLNNNHHQFPTKIRNNVGVPNATAPATSVHELLEC
PVCTNSMYPPIHQCHNGHTLCSTCKARVHNRCPTCRQELGDIRCLALEKVAESLELPCKF
YNLGCPEIFPYYSKLKHETVCNFRPYNCPYAGSECSIVGDIPFLVTHLRDDHKVDMHTGC
TFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGAAPVYMAFLRFMGDENEAR
NYTYSLEVGGNGRKLIWEGTPRSIRDSHRKVRDNHDGLIIQRNMALFFSGGDRKELKLRV
TGRIWKEQQNPDAAPIPNICS
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggatatagatagtattgagtgtgtttcttcagttgatggtttggaggaagaggagatc
cctcatcttgataatcaccttaataataatcatcatcaatttcccacaaaaattaggaat
aatgttggtgttcctaatgcaactgcaccagcaactagcgttcatgaattgcttgaatgt
cctgtttgtaccaattctatgtaccctcctattcaccagtgccataatggtcatacattg
tgctcgacctgtaaagcaagagtgcacaaccgatgtcccacttgtcgacaagagcttggt
gatattaggtgcttagctttggagaaggtagcagaatcgcttgagttgccttgtaaattt
tacaatttgggttgcccggaaatatttccttattatagcaagcttaaacacgagacggtg
tgcaattttagaccatacaactgtccctatgctggctctgagtgttctatcgttggcgat
atccccttcctggtgacccatctaagggatgaccacaaggtggacatgcacactgggtgt
acttttaatcatcgctatgtaaaatcaaatcctcgagaagtggaaaatgctacgtggatg
ttaactgtttttcattgttttggccaatacttctgcctccactttgaagccttccaactt
ggtgcagctcctgtgtacatggcattcctccgttttatgggcgacgaaaacgaggctcga
aattacacgtacagcctcgaagttggaggaaacgggagaaaacttatctgggaaggaacc
ccacgaagcatccgagatagccaccgaaaggtaagggataaccatgacggcctcatcatc
caacgaaatatggcactcttcttctcgggtggggatcgcaaggagttgaagctgagggta
accggaagaatatggaaggagcagcaaaacccggatgctgctccgatacccaatatatgt
agctaa
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integrated database retrieval system
