Amaranthus tricolor (tampala): 130806359
Help
Entry
130806359 CDS
T09367
Name
(RefSeq) pentatricopeptide repeat-containing protein At2g15820, chloroplastic
KO
K27936
pentatricopeptide repeat-containing protein, chloroplastic
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atri03041
]
130806359
Spliceosome [BR:
atri03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
130806359
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LAGLIDADG_2
PPR_2
PPR
Motif
Other DBs
NCBI-GeneID:
130806359
NCBI-ProteinID:
XP_057527379
LinkDB
All DBs
Position
2:34011917..34017155
Genome browser
AA seq
821 aa
AA seq
DB search
MLLLSYGKPLQLTPLSLLNFLPSNSFVSNPNLSSFSLPSRLLNPPFSSSIYLQNLKPLQF
HVKASNGSLTSVEQLVGKKTVKETNSNLGVDEEDGEMMRFDIEWDGNELRKNLNQQFESP
VVEMKELEEFPENWRRSKLAWLCKELPVQKRPTQIRLLAAQKKWMRQDDATYIALHFMRI
RVHDSAFWVYEWMIQQHWYRFDFSLATKLADNMGRERKFAKCRKIFDDIINQGRVPSEST
FHILIIAYLSASDEDCLKEACDIYNRMIHLGAYYPQLSLQNALFKAIVTKPANSVKQYLG
QAEFIFHNLATRGLEIHKEIYGGLLWLHSYQDIIDKERMLFLLTEMHLRGIPESRYTLLS
ILRACSKEGDVDTAEKTWAKLLQCDGGIPTQAYVYKMDVYAKVGDSMKSLEIFRELQAKV
GATNIVAYRKIIEIMCTDQHVELVGSLMEELIRSGLKSLTPSYVDLLNMYNKLNLHDKVE
STFLECLDKCEPTRTLFSIYLDSLVKTSNVEKAESIFNQMLENEAIGAGSRSCNTLLYGY
ISCGDNLKAEKLYKFMRQKNYEVDSSLMEKLDNIFSSQKKVVSRKVKLKLTPEQREILVG
LLLGGLQIEYAGKNKLYFINFEFKDNPGIHSILKRHIYNKFHEWVQHSDGSSDDTEFKFI
PSKFLTVAHTCFGFYADQFWANGRQTIPKLIHRWLSPRVLAYWFMHGGYTTPTGDIVLKV
KGSKSEAERVFKALKSYSLDFRIKQKGKVFWLGFIGSHCYSFRKLIEPYLLDDLQNFLKA
DKQPIKNSITERSNYWSSNESDFDDSVEPGSGFSDSDDALF
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgctgctactaagctatggaaaacctctacaactaactccactctctctccttaacttt
cttccttcgaattccttcgtttccaatcccaatctctcttctttctctctcccttctcgc
cttctcaatccgccattttcatcatcaatatacctacaaaatctaaaaccccttcaattc
catgtaaaagccagcaatggcagtcttacttccgtcgaacaattggtgggcaaaaaaacc
gtaaaagaaacaaattcaaatctgggtgttgatgaggaagatggagaaatgatgagattt
gatatagaatgggatggcaatgaattgaggaagaatcttaatcaacaatttgaatcacca
gttgtagagatgaaagaattggaggaatttccggagaattggaggcggtctaagttagct
tggctttgtaaagagctgcctgttcaaaaacgcccaactcaaattcgacttcttgctgct
cagaaaaagtggatgcgccaggatgatgctacttatattgctcttcattttatgcgtatt
cgtgtccatgattctgctttctgggtgtacgagtggatgatccaacaacattggtatcgg
tttgatttttcactggccaccaaacttgctgataatatgggtagagaaaggaagttcgca
aagtgtcggaagatttttgatgatataattaatcagggtcgggtaccaagtgagtcaacg
tttcatatcttgatcattgcatatctcagtgcctccgatgaggattgccttaaggaagca
tgtgacatctacaaccgcatgatacatttaggagcatattaccctcaacttagtctccaa
aatgctctcttcaaagctattgttaccaaacccgcaaactctgtaaagcagtaccttgga
caggcagagttcattttccataatctcgcaactcgtggattagagatacacaaggaaatt
tatggtggcctcctttggcttcatagctatcaggatatcattgataaagagcggatgctc
tttctgttaacggagatgcatttgaggggaattccggagagtagatatactctcttatct
attctaagggcttgctctaaagaaggtgatgtagatactgcagaaaagacttgggctaag
cttctccaatgtgatggtggcattccaactcaagcttatgtgtacaaaatggatgtatat
gctaaggttggtgattccatgaagtctttggagatatttagagaattgcaggcgaaggtc
ggagcaacaaatattgtggcatatcgaaagatcatagagattatgtgtactgatcaacac
gtggagcttgtcggttcccttatggaagagctcattaggagcggtctcaagtctcttaca
ccatcatatgtagatcttttgaatatgtacaacaaattaaacttacatgataaagtagag
tccaccttcctggaatgcctcgacaaatgcgagccaactcggactctatttagcatctac
ttggactcattggtgaaaactagcaatgtcgagaaagctgaaagcatcttcaaccagatg
ttagagaatgaggctattggtgccggcagcaggtcatgtaataccctgttatacgggtac
atatcttgtggagataatttgaaggccgaaaaactatacaagttcatgcgccagaagaat
tacgaggttgattcctctctaatggagaagcttgataacatttttagctcccagaagaaa
gtggtttctaggaaagtgaagctgaaactaactccagaacaaagagagattttggtgggt
ttgctgttaggcggcttgcaaatcgagtacgctgggaaaaacaagttatatttcatcaat
ttcgagtttaaggataatcctggtattcattctatcttaaaacgacatatatataacaag
ttccatgaatgggttcaacattccgacggctcatcagacgatactgaattcaaattcatc
ccttcgaaatttctgacagttgcgcacacttgttttggtttctatgctgatcaattttgg
gctaatgggcggcaaacaattcccaaattgattcatcgatggttgtcaccgcgtgttctt
gcgtactggtttatgcatggaggatacacgacaccaaccggggacattgtgttgaaagtg
aaaggaagcaaaagcgaagctgagcgagtctttaaagctttgaaatcatattcattggac
ttcaggataaagcaaaagggtaaggtgttttggttgggtttcataggaagccattgttat
agctttagaaaacttatagaaccatatcttttagatgacttacaaaacttcctaaaagct
gataaacaacctataaagaattcaattacagaaagatcaaattactggtcgagtaatgag
tctgattttgatgacagtgtggaacctggttctggattttcagacagtgatgatgctttg
ttttaa
DBGET
integrated database retrieval system
