Amaranthus tricolor (tampala): 130806616
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Entry
130806616 CDS
T09367
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri00040
Pentose and glucuronate interconversions
atri01100
Metabolic pathways
Module
atri_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
130806616
Enzymes [BR:
atri01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
130806616
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
DUF7460
DUF3737
NosD
Motif
Other DBs
NCBI-GeneID:
130806616
NCBI-ProteinID:
XP_057527748
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Position
1:17069536..17072905
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AA seq
385 aa
AA seq
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MAIIWVLIIQRSILANNINYNLVRFGAKPDGSDTSKAFTSAWNTACQSENPSTIVVPKGR
YFVNSALLFSGKNCKVKSIKFVIRGTLVAPSDFRLLGDAGTWFAFEDVTGVSISGGVFDG
QGSGLWACKRSSERCPAGATTLRFSNSNNIEINGVTSVNSQLYHIVFDGCKNVKVEGVKI
STSGRSPNTDGIHVQLSNGVTILNSNIATGDDCVSVGAGTTNLWIENMACGPGHGVSIGS
LGKDVNEAGVVNVTVKTATFTGTENGVRIKSWGRPSNGFVRNVLFQHITMLNAQNPIIID
QNYCPDDKGCSGKASGVRISDVTYQDIHGSSATPIAVKFDCSSEYHCTNIKLEGVDLTYR
NQQAASSCVNTIGSTYGVIEPKSCF
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggcgataatatgggtgctaataatccaacgatcaatattggctaacaacataaattat
aacctagtaaggtttggagcaaaaccagacggatcagacacgtctaaggcatttacgtct
gcatggaacacagcatgtcaatcagaaaatccttctacaattgtagttcctaaaggcagg
tattttgttaattcagccttactttttagtgggaagaattgcaaggtcaaatctataaag
tttgttattagaggtaccttagtagcaccttctgatttccgactgctcggagatgctggt
acttggttcgctttcgaggatgtcaccggagtttctatatctggtggtgtgtttgacgga
cagggttctgggttgtgggcttgtaagaggtctagcgagaggtgtcctgctggagcaacg
acacttcggttctcaaattcaaataatattgaaataaatggagttacatcagtaaacagc
caattatatcacattgtttttgacgggtgtaaaaatgtaaaagtggagggtgtaaagatc
tcaacttcaggcaggagtcccaacacagatggtattcatgtccaattatcaaatggagtc
actatcttgaactctaacattgcaaccggagacgattgtgtttcagttggagccggtact
actaatctttggattgaaaacatggcttgtggcccgggtcatggcgttagcattggaagc
ttaggcaaagatgtaaatgaagcaggagttgtgaatgtgacagtgaagacagctactttt
actgggactgagaatggtgttagaatcaaatcttggggaagacccagcaatggttttgtg
agaaatgtactattccaacatattacaatgctcaatgctcaaaatcccatcattatcgac
caaaactattgtcctgacgacaaaggttgctctggaaaggcatccggagtaagaatcagt
gatgtaacatatcaagatattcatggatcatcggcgactccaattgcagtaaaatttgat
tgcagctcagaataccattgcacaaatataaaattggagggagtagatcttacctacaga
aatcaacaagctgcttcttcttgtgttaatactataggatccacctacggtgttattgag
cctaaaagttgcttctag
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