Amaranthus tricolor (tampala): 130806884
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Entry
130806884 CDS
T09367
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03030
DNA replication
atri03410
Base excision repair
atri03420
Nucleotide excision repair
atri03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
130806884
03410 Base excision repair
130806884
03420 Nucleotide excision repair
130806884
03430 Mismatch repair
130806884
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
atri03032
]
130806884
03036 Chromosome and associated proteins [BR:
atri03036
]
130806884
03400 DNA repair and recombination proteins [BR:
atri03400
]
130806884
DNA replication proteins [BR:
atri03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
130806884
DNA Replication Termination Factors
ELG1-RFC complex
130806884
Chromosome and associated proteins [BR:
atri03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
130806884
DNA repair and recombination proteins [BR:
atri03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
130806884
Check point factors
HRAD17(Rad24)-RFC complex
130806884
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_lid_RFC1
AAA_22
Rad17
RCF1-5-like_lid
RuvB_N
AAA_5
Mg_chelatase
AAA_assoc_2
AAA_16
AAA_11
SLFN-g3_helicase
nSTAND3
AAA_14
nSTAND_NTPase5
PhoH
AAA_24
ResIII
AAA_2
AAA_30
AAA_19
AAA_28
AAA_7
AAA_25
RNA_helicase
NPHP3_N
Parvo_NS1
bpMoxR
DUF815
AAA_18
TIP49
NB-ARC
Motif
Other DBs
NCBI-GeneID:
130806884
NCBI-ProteinID:
XP_057528092
LinkDB
All DBs
Position
2:complement(38606632..38615007)
Genome browser
AA seq
339 aa
AA seq
DB search
MAPLLPSSQQWVEKYRPKQVKDVAHQDEVVRVLTNTLETTNCPHMLFYGPPGTGKTTTAL
AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSAQRHGGYPCPPYKIII
LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKSLPEQVMK
SRILHICGEESLNLDSQALSTLSVISQGDLRRAITYLQGAARLYGSSISSTELISVSGVI
PEDVVQKLLAACKSGNFDSADKEVNNVISEGYPVSQMISQLFDIIVEANDLSDEQKARIF
KKLGEADKCLVDGADEYLQLLDVAGNTMRAYCNMAQDSY
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggcgccattgttgccgagctctcaacaatgggtggaaaaatatcggccgaagcaagtg
aaggatgttgcgcaccaggatgaagtcgttcgagtactcaccaacaccctcgaaaccacc
aattgtccgcatatgctattttatggtccgcctggtactggaaaaaccaccacggctctc
gccattgcacatcagcttttcgggcccgaactctacaagtccagggtgctagagttgaat
gcaagtgatgaccgtggtatcaatgttgttcgcacaaaaatcaaagattttgctgctgtt
gctgtaggttctgcccaacgacatgggggttatccatgtcctccatataaaattatcatt
ctagacgaggcagattcaatgacagaagatgctcagaatgcattgcgtcggacaatggag
acttactcaaaagttacaagattctttttcatatgtaactatattagcagaatcatagag
ccgctggcttctaggtgtgccaaatttagatttaaatcccttcccgaacaggtcatgaaa
agccgtatcttgcatatatgtggagaagaaagccttaatttggattcacaggcactttca
acactgagtgtgatttcacaaggtgatcttcggagggccatcacatacttgcagggagct
gctcgtttgtacggatcgtcaatatcctccacggagttgattagcgtttccggggtcata
ccagaggatgttgttcagaagcttttggctgcttgcaaaagtggtaactttgattcggca
gacaaagaagtgaataatgtcatttcagaaggctatccagtttctcagatgatttcccag
ttatttgatattattgtggaagctaacgatttgtcagacgagcagaaggcgaggatcttt
aaaaagctaggagaagcagataagtgtcttgttgatggagcggatgagtatttgcagttg
ctagatgttgctggtaatacgatgcgtgcctattgcaacatggctcaagactcctattag
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integrated database retrieval system