KEGG   Amaranthus tricolor (tampala): 130806884
Entry
130806884         CDS       T09367                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
atri  Amaranthus tricolor (tampala)
Pathway
atri03030  DNA replication
atri03410  Base excision repair
atri03420  Nucleotide excision repair
atri03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:atri00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    130806884
   03410 Base excision repair
    130806884
   03420 Nucleotide excision repair
    130806884
   03430 Mismatch repair
    130806884
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:atri03032]
    130806884
   03036 Chromosome and associated proteins [BR:atri03036]
    130806884
   03400 DNA repair and recombination proteins [BR:atri03400]
    130806884
DNA replication proteins [BR:atri03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    130806884
  DNA Replication Termination Factors
   ELG1-RFC complex
    130806884
Chromosome and associated proteins [BR:atri03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    130806884
DNA repair and recombination proteins [BR:atri03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     130806884
  Check point factors
   HRAD17(Rad24)-RFC complex
    130806884
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_lid_RFC1 AAA_22 Rad17 RCF1-5-like_lid RuvB_N AAA_5 Mg_chelatase AAA_assoc_2 AAA_16 AAA_11 SLFN-g3_helicase nSTAND3 AAA_14 nSTAND_NTPase5 PhoH AAA_24 ResIII AAA_2 AAA_30 AAA_19 AAA_28 AAA_7 AAA_25 RNA_helicase NPHP3_N Parvo_NS1 bpMoxR DUF815 AAA_18 TIP49 NB-ARC
Other DBs
NCBI-GeneID: 130806884
NCBI-ProteinID: XP_057528092
LinkDB
Position
2:complement(38606632..38615007)
AA seq 339 aa
MAPLLPSSQQWVEKYRPKQVKDVAHQDEVVRVLTNTLETTNCPHMLFYGPPGTGKTTTAL
AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSAQRHGGYPCPPYKIII
LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKSLPEQVMK
SRILHICGEESLNLDSQALSTLSVISQGDLRRAITYLQGAARLYGSSISSTELISVSGVI
PEDVVQKLLAACKSGNFDSADKEVNNVISEGYPVSQMISQLFDIIVEANDLSDEQKARIF
KKLGEADKCLVDGADEYLQLLDVAGNTMRAYCNMAQDSY
NT seq 1020 nt   +upstreamnt  +downstreamnt
atggcgccattgttgccgagctctcaacaatgggtggaaaaatatcggccgaagcaagtg
aaggatgttgcgcaccaggatgaagtcgttcgagtactcaccaacaccctcgaaaccacc
aattgtccgcatatgctattttatggtccgcctggtactggaaaaaccaccacggctctc
gccattgcacatcagcttttcgggcccgaactctacaagtccagggtgctagagttgaat
gcaagtgatgaccgtggtatcaatgttgttcgcacaaaaatcaaagattttgctgctgtt
gctgtaggttctgcccaacgacatgggggttatccatgtcctccatataaaattatcatt
ctagacgaggcagattcaatgacagaagatgctcagaatgcattgcgtcggacaatggag
acttactcaaaagttacaagattctttttcatatgtaactatattagcagaatcatagag
ccgctggcttctaggtgtgccaaatttagatttaaatcccttcccgaacaggtcatgaaa
agccgtatcttgcatatatgtggagaagaaagccttaatttggattcacaggcactttca
acactgagtgtgatttcacaaggtgatcttcggagggccatcacatacttgcagggagct
gctcgtttgtacggatcgtcaatatcctccacggagttgattagcgtttccggggtcata
ccagaggatgttgttcagaagcttttggctgcttgcaaaagtggtaactttgattcggca
gacaaagaagtgaataatgtcatttcagaaggctatccagtttctcagatgatttcccag
ttatttgatattattgtggaagctaacgatttgtcagacgagcagaaggcgaggatcttt
aaaaagctaggagaagcagataagtgtcttgttgatggagcggatgagtatttgcagttg
ctagatgttgctggtaatacgatgcgtgcctattgcaacatggctcaagactcctattag

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