Amaranthus tricolor (tampala): 130807372
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Entry
130807372 CDS
T09367
Name
(RefSeq) tRNA (carboxymethyluridine(34)-5-O)-methyltransferase
KO
K10770
alkylated DNA repair protein alkB homolog 8 [EC:1.14.11.-
2.1.1.229
]
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
atri03016
]
130807372
Enzymes [BR:
atri01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.229 tRNA (carboxymethyluridine34-5-O)-methyltransferase
130807372
Transfer RNA biogenesis [BR:
atri03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
130807372
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GFIT
Motif
Pfam:
Methyltransf_11
Methyltransf_25
Methyltransf_12
Methyltransf_23
Methyltransf_31
MetW
Ubie_methyltran
Motif
Other DBs
NCBI-GeneID:
130807372
NCBI-ProteinID:
XP_057528542
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Position
3:26728187..26734805
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AA seq
388 aa
AA seq
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MIFGLECCRVSYQIQRALHIVPSLSVVDCYSLVSNTMKEIRVGRPSFYSAAAFDRESKNQ
PSCLISEDRSSSTHALCTPEIEKTYVHKVYDAIAPHFSSTRFAKWPKVASFLDSLPLGSL
VLDAGCGNGKYLGYNPNCFFVGCDISSPLVSICAERGHEALVADAVNLPYKTGFGDAAIS
IAVLHHLSTGSRRRKAIEELVRVVRKGGLVLITVWAVEQEDQGLLNKWTPLPHKYLDEWI
GPSSPRVCSPRSFNLESIPESEETSSKESCKVSHESLGENPNRIININNQEDKSMTSDGD
VSKENRQEYFVPWHLPYHRAEVSGASACAVASGFARKDDKKGAVVYDRYYHVFSEGELES
LVSGMSNAVIVDRFFDKSNWCIILEKTQ
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgatatttggccttgagtgttgcagagtttcttatcaaattcaacgggcattacacata
gttccttcattatctgttgttgactgttactctttagtctctaatacgatgaaggaaatt
agagtaggccgcccttccttttactcggctgctgcatttgatagagaatctaagaatcaa
ccatcttgcttgataagtgaggatagatcttcatctacccatgctctgtgtacccctgaa
atcgagaagacgtatgttcataaggtttatgatgcaattgcaccccattttagttcaact
agatttgctaagtggccaaaggttgcatcttttttagattctttgcctctaggatctctt
gtccttgatgcgggctgtggaaacggaaaataccttggttataatcccaactgctttttt
gtaggatgtgatataagttcccctttagttagtatatgtgcagagagagggcatgaagct
ttggttgctgatgctgtaaatttgccttataaaactggttttggtgatgcagcaatctct
attgctgtattgcatcatttaagtactggaagtaggagaagaaaagccattgaagagctg
gttcgagttgttaggaaggggggattagtgttgataacagtatgggctgtggagcaagaa
gaccaaggtttgcttaacaaatggaccccattgccccataagtacctagatgagtggatt
ggtcctagtagtcctcgtgtatgtagcccccggtctttcaacttggaaagcattcctgaa
agtgaagagaccagttctaaagagtcctgcaaagtctcccatgagtccctgggtgaaaat
ccgaatagaatcataaatataaacaaccaagaagacaagtcaatgacatccgatggtgat
gttagtaaagaaaatcgacaggagtactttgttccctggcatttaccctatcatcgtgct
gaagttagtggcgcttctgcttgtgctgttgcaagtggttttgcacgaaaagatgacaag
aaaggcgctgtggtgtatgacagatattatcatgtcttcagtgagggtgaacttgaaagc
ttagtctccggaatgagcaatgctgtaatcgtggatcgcttctttgacaaatcaaattgg
tgtattattctcgagaaaacacaatga
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