Amaranthus tricolor (tampala): 130807376
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Entry
130807376 CDS
T09367
Name
(RefSeq) plant-specific TFIIB-related protein 1
KO
K03124
transcription initiation factor TFIIB
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
130807376
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atri03021
]
130807376
Transcription machinery [BR:
atri03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
130807376
Prokaryotic type
Archaeal type
TFB
130807376
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Cyclin_C
Zn_Ribbon_TF
HTH_Mga
zf-UBP
Rhodanese_C
zf-C2H2_7th_ZNF462
Motif
Other DBs
NCBI-GeneID:
130807376
NCBI-ProteinID:
XP_057528547
LinkDB
All DBs
Position
3:26791035..26794780
Genome browser
AA seq
529 aa
AA seq
DB search
MIKNFLKPRDCGEFKRKSTVGIVNPPRRGEMKCIYCTAPPSNGSRCATTSSGRHITECTS
CGRVIEERQTQTHHLFHLRAQDSPLFLSTSDLPFSPPQPPSPDPEDPFDHTGFITAFSTW
SLHHSPLFAVSSLSFAGHLAELERVLEGTSVNTSSSSGVVVDNLRAYLQIVDVASILGLD
HDISDHAFQLFRDCSSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANLPQKEI
GKYIKILGEALQLSQPINSNSIAVHMPRFCNLLQLNKSAQELATHIGEVVMNKCFCTRRN
PISISAAAIYLACQLEDRRKTQAEICKVTGLTEVTLRKVYKELLENWDDLLPSNYTPVVP
PEKAFPTTTIASGRSTTPRGETADAAILDREKHPELKPNMNQTLETTHLDRIKGEIDSTS
PTTNKVSFSWKPGFPRSGEINQGINFKFNSSKQEATEHKSIGGSVRPNPFVAAQVLGATS
SARSSLSSSSSPNIHNLSGHYQMAAGSSDHKESSKHNQGRGSDAAGGSR
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaaaattttctcaaacctcgtgattgtggtgagttcaaacgtaagagcactgta
ggaattgtgaacccacccagaagaggcgaaatgaagtgtatatactgcacagccccgccg
tcaaacggtagccgatgcgcgaccaccagttcaggccgacacattaccgaatgcacttcc
tgcggccgcgtgattgaagaacgtcaaactcaaactcatcatttgttccatcttcgagct
caagattctcctcttttcctctctacttccgaccttcccttttcccctcctcaacctcct
tcacctgaccctgaagatcctttcgatcataccgggtttatcactgccttttcaacttgg
tctcttcaccattcccctctttttgctgtttcttctctttcttttgccggacacttggct
gaattggaacgtgttcttgagggtacttctgttaatacttcttcttcttctggtgtggtg
gttgataatttaagggcttatttacagattgtggatgttgcttctatattgggtttggat
catgatatttctgatcatgcttttcagttgtttagggattgttcttctgctacttgtttg
aggaatcgtagtgttgaagctcttgctactgcttgtcttgttcaggctattcgtgaagct
caagaacctcgtactcttcaggagatttcaattgctgcaaaccttcctcagaaagagatt
ggaaagtatatcaagatccttggagaagctttacaacttagtcaaccaatcaatagtaat
tccatagccgtacatatgcctagattttgtaaccttctccagcttaataaatctgctcag
gaacttgcaactcacattggagaagttgtgatgaacaaatgcttttgcacacgtaggaat
cccataagcatatcagctgctgctatttatttagcctgtcaattagaagatagacggaag
acgcaggcagagatatgtaaggtaacaggtctcactgaagtcactcttaggaaagtgtac
aaggagttgctagagaactgggatgatttactcccatctaattatactcctgttgtccct
cctgaaaaagcatttccaactactacaatagcctcaggacgttcgacaacccctagaggt
gaaactgcagatgctgcgattttggatcgagagaaacatcctgagctcaagccaaacatg
aatcagaccttggagacaacccatctggatagaataaagggggagattgatagcacttcc
ccaactacaaataaagtgtccttttcttggaaacctgggtttcctagaagtggtgagatc
aatcaaggaattaactttaagttcaattcgagtaaacaagaagcaacagagcataaaagc
attggtggctcggtgaggcctaacccttttgttgcagctcaggttttaggtgcaacttct
tcagcacgatcatccctttcatctagctcatctccgaatattcataatttatcaggacat
taccaaatggcagcaggttcatccgaccataaagaatcgagcaagcataatcaaggcaga
ggttctgatgctgctgggggtagccggtag
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integrated database retrieval system
