Amaranthus tricolor (tampala): 130807399
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Entry
130807399 CDS
T09367
Name
(RefSeq) serine hydroxymethyltransferase 3, chloroplastic-like
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri00260
Glycine, serine and threonine metabolism
atri00460
Cyanoamino acid metabolism
atri00630
Glyoxylate and dicarboxylate metabolism
atri00670
One carbon pool by folate
atri01100
Metabolic pathways
atri01110
Biosynthesis of secondary metabolites
atri01200
Carbon metabolism
atri01230
Biosynthesis of amino acids
atri01240
Biosynthesis of cofactors
Module
atri_M00532
Photorespiration
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
130807399
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
130807399
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
130807399
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
130807399
Enzymes [BR:
atri01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
130807399
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Motif
Pfam:
SHMT
Beta_elim_lyase
Motif
Other DBs
NCBI-GeneID:
130807399
NCBI-ProteinID:
XP_057528575
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Position
3:27030613..27032268
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AA seq
509 aa
AA seq
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MQTYCGAGTSTTMGSIPNPKIPLFPQFNQKGFNHLSFFDYSIHFSKPSRFSFVSNSLVTG
RPPSSVSVPAPGTGDDSSGFKDNGLSDTDPEVYNIIGKEKERQFKSLELIASENFTSRAV
MEAVGSCLTNKYSEGLPGKRYYGGNEHIDELEILCQQRALEAFHLDGEKWGVNVQPLSGS
PANFEVYTALLKPHDHIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLV
DYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRKIADAVGAFLMMDMAHISGLVAASVV
GYLFDYCDVVTTTTHKSLRGPRGGMIFYKKDTILGVDLESSINNAVFPGLQGGPHNHTIG
GLAVCLKHAQSQEFKAYQNAVISNCRALASRLVELGYKLVSGGSDNHLVLVDLRPLGVDG
ARVEKILDIASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFKETEFVATADFIHEGIQ
ITLEATKLRPKTKPQHILYTLTMSRNQFN
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacttattgtggtgcaggaacatcaacaactatgggttcaatcccaaaccccaaa
attcccctttttcctcaattcaatcaaaaagggtttaatcatttgagttttttcgattat
tccatccatttctccaagccttctcgtttttcttttgtttctaatagtttagttactggt
agaccaccctcttctgtctctgttcctgctcctggtactggagatgattcaagcggcttc
aaagataatggtctgagtgataccgatcccgaagtgtataatatcattggcaaggaaaag
gaaaggcagtttaaaagtttggaacttattgcctcggaaaattttacttctagagctgtt
atggaggctgttggttcatgtctcactaacaaatattctgaggggttgccgggtaaacgg
tattacggtggaaacgaacatattgacgagctcgagatcctctgtcagcagagggctttg
gaagcatttcacctggatggggaaaagtggggtgttaatgttcaaccattgtctggttcg
cctgcaaattttgaggtttacactgcacttttaaagccacatgaccatatcatgggttta
gatttacctcatggaggacatttgtctcacggtttcatgactcctaaaagacgagtttca
ggaacatcgatctattttgaatcgatgccttatcggcttgacgaatctacaggtttggtt
gattacgacatgcttgagaaaactgctatcctgtttcgaccgaaactcattattgctggt
gccagtgcgtatcctcgagattttgattatcctcgtatgaggaagattgcggatgcagtt
ggtgctttccttatgatggatatggcacatataagtgggcttgttgctgcctctgtcgtt
ggttacctatttgattactgtgatgtagtcacaactacaactcacaagtctctacgagga
cctagaggaggaatgatcttctacaaaaaggatacaattttgggagttgatctagaatct
tccatcaataatgccgtctttcctggcttacagggtggcccacataaccacaccatagga
ggactagcagtttgccttaagcatgcacaatctcaagagtttaaggcgtaccaaaacgct
gtaatctcaaactgtagagctcttgcgagccgactggttgaattgggatacaaactagta
tctggtgggagcgataaccaccttgttcttgttgatcttaggccattgggagttgatggt
gctcgagttgagaaaattcttgatatcgcttccattacactgaataagaattcggttcct
ggtgacaagagtgccttagtccctggcggcatacgtattggttcacccgccatgacaacg
agagggtttaaagaaacagagtttgttgccaccgcagactttattcatgaaggaatccaa
ataactcttgaagcaaccaagttacgtcccaaaacaaaaccccaacatatattatatact
ctaacaatgtcaaggaaccaatttaactaa
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