Amaranthus tricolor (tampala): 130807417
Help
Entry
130807417 CDS
T09367
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri00040
Pentose and glucuronate interconversions
atri01100
Metabolic pathways
Module
atri_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
130807417
Enzymes [BR:
atri01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
130807417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-GeneID:
130807417
NCBI-ProteinID:
XP_057528602
LinkDB
All DBs
Position
3:329108..331228
Genome browser
AA seq
387 aa
AA seq
DB search
MDFKASLTKNSLILVLIFCLITKGQCQVKFFTLENYGAVKGGEVDNSKVLVKAWNDACKW
KGASRLDISSETYFVNPVILSGPCSGPIEFHNSGTLKAPLSLKPGSWIEFRHINRLTLTG
GGSFDGQGPPKQPNSRLSSMLSLSFVTNSKAENIKLRNSQGTHLILFAVNNTELNEIRIS
SPEESHNTDGIKIGASNGITITNSNIASGDDCIAILTGSKNITISGVNCGPGHGISIGSM
GHSPNEHVDHVTVKHCNLSGTTNGLRIKTWATDYPGTVSNIQYQEIIMDNVYNPIIFDQH
YCDAGSCGQGTSKVEIQDVTFSNIHGTSRSKIAVNLQCSRSTPCNRIELEDINIKYNGED
GTSISNCSYASGKVSGVQLPKPCPLFS
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggatttcaaagcatctcttacaaaaaattctctcatattagttttaatcttttgctta
atcaccaaagggcaatgtcaagtaaagttcttcactttggaaaattatggtgctgtcaaa
ggtggagaagtggataatagtaaggtgttagttaaagcatggaatgatgcgtgcaaatgg
aagggtgcctcaagattagacatatcttcagagacttactttgtaaatccagtaatattg
agcggcccatgtagtggcccaatagaatttcataattcgggcactttgaaggctccattg
agcttgaaaccgggctcttggatcgagtttcgtcatatcaacagactgacactaactgga
ggtgggtcatttgatggtcaaggcccaccaaaacaacctaattctaggctttcctcgatg
ctgagcttaagctttgtgacaaattcaaaagcagaaaacataaaactaaggaacagccaa
gggacccatttgatattatttgcagtgaacaatacggagttgaatgaaataaggatatca
tccccagaagaaagtcataacacggatggcattaagattggagcttcaaatgggattaca
ataacaaactcaaacatagcctcaggagatgattgtattgccattctcaccggatctaaa
aacataaccataagtggtgttaattgtggtcctggacatggaattagcattggaagcatg
ggacattcgcctaatgaacatgtggatcatgttactgtcaaacattgcaatctctctggt
actactaatggtttaagaatcaagacttgggctactgattatcctggaactgtatcaaat
attcagtatcaggagattatcatggataatgtttataatcctatcatttttgatcaacat
tactgtgatgctggatcttgtggacaggggacttcaaaagttgaaatacaagatgtgacg
ttcagcaacatacatggaacatcaaggtcaaagattgcagtgaatttacaatgtagtagg
agtacaccgtgtaatagaatagagttggaggacataaatataaagtacaatggggaagat
ggaacatctatttcaaattgttcctatgcaagtggcaaggtttctggtgtacaacttcct
aaaccttgccccttattttcataa
DBGET
integrated database retrieval system
