KEGG   Amaranthus tricolor (tampala): 130807438
Entry
130807438         CDS       T09367                                 
Name
(RefSeq) protein decapping 5
  KO
K18749  protein LSM14
Organism
atri  Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:atri00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:atri03019]
    130807438
Messenger RNA biogenesis [BR:atri03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     130807438
SSDB
Motif
Pfam: LSM14 FDF SM-ATX
Other DBs
NCBI-GeneID: 130807438
NCBI-ProteinID: XP_057528628
LinkDB
Position
3:28821744..28828039
AA seq 592 aa
MAAEPPKATSSADSYIGSLISLTSKSEIRYEGILYSINTDESSIGLRNVRSFGTEGRKKD
GPQVAPSDKVYEYILFRGSDIKDLQVKSSPPVQPVAPVSSIDNDPAIIQSHYPRPASTST
NLPPAVSAPSADANSHGPQPGHPGSSFPGHLPLYQPGGIGSWGPSPVPGANGSGLAMPMY
WPGFYGPPNGLPHMPQQPLLRPPPGLAAPPSLSQPMLFSGFNSPLTAGSSNLTGSKLPEI
PPSLISSSSTSTNVAQASISQLNVPSVPSTSLVAENSSSSTVSKAANTGLLSTPSFSTVS
QSALSSAPDASIITPAASSKVNTISNSGLLNPSHPQTSSIISSGLSQAEIAKPSLVTPDQ
LVQSGQLPTSSPSTSQTVHKDVEVVQVSSALSSDAKAELVREAQPPILPLPPPASRSFHK
PNGGNFHPRHNYNFRGRDRGRGSGSSCPVTKFTEDFDFMAMNEKFKKDEVWGHLGKSNKS
HAGDNDVNGENDFEDAEEESPQLDAKTVYNKDDFFDTLSCNTGDHDSQNGRTRFSEQLKI
DAETFGEYVRYHRGGRGGRPPGRGGRGRGSYHGRGYGNVGRGRGRGVSYRSS
NT seq 1779 nt   +upstreamnt  +downstreamnt
atggcggctgaacctccgaaggcgacatcctcagccgattcgtacatcggcagtttgatt
agtctcacatcaaagagtgagatcagatatgaaggcattctctacagcatcaacaccgat
gagtccagtattggcctccgtaacgtcagatcattcggaactgaaggaagaaagaaagat
ggcccacaagtagctccgagtgataaggtttatgaatacatacttttccgcggcagtgat
attaaggatttgcaggtgaaatcatcccctcctgttcagccagttgcacctgtgtcatcc
atcgataatgatccagctatcatacagtcacattatcctcgtccagcgtcaacatctact
aatctgccaccagctgtcagtgctccatcagctgatgctaattctcatggtccacagcct
ggacaccctgggtcaagtttcccaggtcatttgcctttgtatcaacctgggggtataggg
tcttgggggccgtcgcctgtacctggtgcgaatggtagtggacttgcgatgcctatgtat
tggcctgggttttatggccctccaaacggtcttcctcatatgccccaacagcccttgctc
agaccacctcctggacttgctgcgccaccttcactgtcgcagccaatgctgttttctggg
ttcaattcgcctttgacagcaggatcttcaaatttaactggctctaaattgcctgaaatt
ccccctagtctgattagctcaagcagtacatccactaatgtagcacaggcctctatatca
caattgaatgtaccttctgtgccatctaccagtctagttgctgaaaactcgtccagttct
actgtgtctaaggctgccaataccggtcttctttcaacgcctagcttctctactgtatct
caatcggccctctcttctgctccagatgctagtattataacacctgctgcctctagcaag
gttaacactatttctaattcaggcttgttaaacccaagccatcctcaaacctcgtccatc
atcagttctggtttaagccaggcagaaattgctaagccttctctggtcacccctgatcaa
ctagtgcagtctggacaattgccaacttcttcaccttcaacttcacaaactgttcacaaa
gatgtggaagttgttcaagtgtcatcagctttgtcttctgatgcaaaagcagaattggtg
agggaagcacagccaccgatattgcctctgccacctcctgcatcaaggtctttccacaag
cctaatggtggtaattttcatccacgtcataattacaacttccggggacgtgatagagga
agaggaagtgggagctcatgtccagtaaccaaatttactgaggacttcgatttcatggct
atgaatgagaagttcaaaaaggacgaagtatggggtcatcttggtaaaagtaacaagtcc
catgctggagacaacgatgttaatggtgagaatgattttgaggatgctgaagaggaatct
ccacaactcgatgcaaagactgtttataataaggacgacttctttgataccctttcctgc
aacactggtgatcatgactcacaaaatgggaggacaagattctccgagcagttgaagata
gatgctgagacatttggtgagtatgttagatatcatcgaggtgggcgtggtggccggcca
ccaggtcgtggtggtcgtggtcgtggatcatatcatggaagggggtatggaaacgttggt
aggggccgaggacgtggtgtgtcttatcggtcttcctga

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