Amaranthus tricolor (tampala): 130807504
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Entry
130807504 CDS
T09367
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atri03021
]
130807504
Transcription machinery [BR:
atri03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
130807504
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
130807504
NCBI-ProteinID:
XP_057528716
LinkDB
All DBs
Position
3:complement(29647139..29675894)
Genome browser
AA seq
1599 aa
AA seq
DB search
MEQQNQRPSSSRSYQFHPAKAIITDLFNLYLGRTSRQKSEEQPPNKAQRRVTAFIREFPP
PNEQFVTDFQNALKQFSDQEQLRLVTESVLISLVVQCSNHSPREEFLLFAIKSLCNVDYI
NWDTLLPSLLSAVSTAEMSLGQGSQATAAVTSTNISQPGMLSSTNTISVSSTFQSNPASP
LTSAQGVGSPVQSANEPSSALTSSPVKFNDIPSSLQQSSVKIGDSAIRDSALNSLRQLCC
KIILISLDSSLKPVTYAEIFNHMQTWLVNWDQRHLVDDDSGATKSWKPYRVHNDWLHSCL
DVIWLLVKEDKCRVPFYELLHSGLQFIENIPNDESLFTLILEIHRRRDMMAMHMQMLDQH
LHCPTFGTHRFLPLATPHFGGEAITNLRYSPITYPSVLGEPLHGEDLAVCIQKGTLDWDR
ALRCIRHALRTTPSPDWWKRVLLVAPCYRPQSNVSTPGAVFTWDMIGEAAVDRIVELLKL
TNSESNCWQEWLIFSDVFFFLMKSGCIDFVDFVDKLVSRLIEDDHSILRTNHVTWLLAQI
IRVELVMNALNNDSRKVETTKKILSFHQEDKSADPNSPQSILLDFISSCQNLRIWSLNTL
TRDHLNNEQLQKGKQIDEWWRQVSKGERMLDYMTMDDKSIGMFWVVSYTMAQPACDMVMT
WLNSAGTEVLQIQPNERLAMMRETSPLPLSLLSGFSINLCMKVAFQMEDSLFSGQGIPSI
ALVETYTRLLLLAPYSLFRSHFSHLTQRNPGTLSKPIATLLVLEILNYRLLPLYRYEGKN
KSLMYDVTKIVGALRGKRGDHRLFRLAENLCMNLILSQRDFFSVKKEGKGSTEFTETLKR
IVIVSLAIIVKTRGIADSEHALYLPSMVEQILSTSQHSWSEKTLSCFPPGLRNALVGRVD
KRGLAIQAWQQAESTVINQCTKLLSPSADPTYLVTYISHSFQVHRQYLCAGAWILMHGHP
ESINSANLARVLREFSPEEVTANIYTMVDVLLQHIHVELQRGHPLQDLLKKASSNLAFFI
WTHELLPLDILVLALIDRDDDPHALHIAISMLERPELQQRLKLFFLTRGPPEHWLYSGMF
KRVDLQKALGNHLSWKDRYPVIFDDIAARLVPVIPLVVYRLIENDAMDHAERVLVIYKQL
LAYHPFRFTFVRDLLAYFYGQLPGKLIVRVLNVLDIPKIPFSESFPQHIAPSNSSTCPPP
DYFASLLLGLVNNVIPPLSSSSKSGSILDASYLSARCPPNKTPATNQSGQTNVSEVQKAF
YQIQDPGTYTQLVLETAVIELLSLPVSASQIVSSLVQILVDIQSTLIQSGNGFHGTSNVS
GQTSVLPTSPSGGSTDSMNASRSVAPASGLNTSNFVSRSGYTCQQLSCLLIQACGLLLAQ
LPQDFHIQLYLEVSRLVKECWWLTDGKRSPSELDSAVNYALLDPTWAAQDNTSTAIGNII
GLLHSFFSNLPQEWLEKAHVIITQLRPITSVAMLRIVFRIMGPLLPRLANAHTLFNKTLS
LLLKALVDVFGINAQPSVPAQASEIIDLIDFLHHVIHYEGQGGPVQPTSKPRSDVLVLFS
RALESLRPDVRHLLSHLTTDFNSSIYASTHPKLVQSPMS
NT seq
4800 nt
NT seq
+upstream
nt +downstream
nt
atggagcagcaaaatcaaaggccatcttcttcgagatcttatcaatttcaccctgctaaa
gcaattatcactgatcttttcaatctctatttagggagaacttcgcgtcagaaatctgaa
gaacaaccaccgaacaaggcacaaaggcgtgtaacagcgttcattagagagtttcctcct
cctaatgaacaatttgttacggatttccaaaacgctctgaagcaattttctgatcaagag
caactacgtctagtaacagaatccgttctgatatctttagttgttcagtgcagtaaccat
tccccaagggaagaatttctgttgtttgccattaaaagcttgtgcaatgtagattatata
aattgggatactttattaccatctcttcttagtgcggtgtccactgcagagatgtcacta
ggtcaaggtagtcaagctacagctgctgttacttcaacaaatatatctcaaccggggatg
ttgtcatctacaaacacgatatctgtttcttctacttttcagtctaatcccgcatctcca
ctgacttcagcccagggtgttggatcccctgttcagtctgctaatgaaccgtcatctgct
ttgacttcgtctcctgttaaattcaatgatattcctagcagcctccaacagtcatctgtg
aagattggtgattctgcaataagggatagtgccttaaatagtctgcgccagctctgctgc
aaaattattctaatcagtctagattcttccttgaaacctgttacatatgctgaaatcttt
aatcacatgcaaacttggctggttaattgggatcaaagacacctagttgatgatgattct
ggtgccacaaaatcttggaagccttacagggttcacaatgactggcttcatagttgtttg
gatgttatttggttgttagtcaaggaggacaaatgtcgtgtaccattttatgaattactg
cacagtggattgcaatttattgaaaacataccaaatgatgaatccttgtttacacttata
ttggaaatccaccgacgacgggacatgatggctatgcatatgcagatgttagaccaacac
ttacactgccctacttttggcacccatagatttttacctcttgcaactcctcattttgga
ggtgaagcaattacaaatttgcgctattcacccatcacatatccaagtgttttgggcgag
ccactgcatggagaggatctggcagtatgtatccagaaaggtactttagactgggataga
gctttgcggtgtatcagacatgctctgcgtacaactccatctccagattggtggaaacgc
gtgctgcttgtagcgccgtgttacaggccacagtctaatgtatccacgcctggagctgtt
ttcacatgggatatgattggtgaggcagcagttgacagaatcgttgaactactgaagttg
acaaattcagagtcgaattgttggcaggagtggcttatcttttcagatgtatttttcttt
ctgatgaagagcggttgcattgactttgttgattttgtggacaagcttgtttcgcgtctc
attgaggatgatcatagtattcttcggacaaatcatgtcacatggttactagcacaaatc
attcgcgttgagcttgttatgaatgctctaaataacgattcaagaaaggttgaaactaca
aaaaaaatcttatcatttcatcaggaagataagagcgctgatcctaacagtccccagagc
atactgcttgactttatcagcagttgccagaacctacgaatctggtctttgaacacgctg
actcgagatcatttgaataatgagcaacttcagaaaggaaagcagattgatgagtggtgg
aggcaagtgagcaaaggtgaacggatgcttgattacatgactatggatgacaaatcaatt
ggaatgttttgggttgtatcatacactatggcacagcctgcttgtgatatggtaatgact
tggcttaattctgctggtacagaagtactgcagatacagccaaatgagagactagcaatg
atgcgggagacaagtcctctgccattatcactactatctggattttcgattaatttgtgc
atgaaagttgcatttcaaatggaggattctttattctctggacaggggattcctagcata
gccttggttgaaacctatacaaggttgcttcttcttgcaccatattcattgtttcgatca
catttcagtcatctaactcaaaggaacccaggcacattaagcaagccaatagcaacactt
ttggtgctcgaaattttgaattatcgattgcttccactttatcggtatgaaggaaagaac
aaaagtttaatgtatgatgtcacaaaaattgttggtgctttgagagggaaacgaggtgat
caccgtctttttagactcgctgagaacctttgcatgaatctaatcctatctcagagagat
tttttttctgtaaagaaggaaggaaagggttcaactgaattcaccgaaactttgaaacgc
attgttattgtttctctggctattattgttaagacacgtggcattgctgactctgagcat
gcactttatcttccttcaatggtggaacaaatattgtcaactagccaacattcttggtca
gaaaaaacattaagctgttttccacctggtctgcgtaatgcattagttggtcgcgtagat
aagaggggcctggccattcaagcatggcaacaggcagagagtactgtgattaatcaatgc
accaagcttctttcaccatcagctgatccaacttatttagtgacgtacattagtcatagc
tttcaagttcatcggcaatacttatgtgctggtgcttggatactaatgcatggacaccct
gaaagtataaatagtgcaaacctggcccgtgtgttgagagaattttcccctgaagaagtg
actgcaaatatttacaccatggttgatgttctacttcaacatatccatgtagaacttcag
cgtggacatcccttgcaggaccttcttaagaaagcatcttcaaatttggcattctttatt
tggactcatgagttgcttcctttggatattttggtccttgcattaattgaccgtgatgat
gatccacacgctttacacattgcaatcagtatgcttgagaggccagagcttcaacaaaga
ttgaaattattctttttgacccgtgggcctcctgagcactggctatattctggaatgttc
aagcgtgtagatttgcagaaggcattaggaaatcatctctcttggaaggaccggtatcct
gtaatttttgatgatattgctgctcgtttggttccagtcattcctttggttgtttatcgt
ctcattgaaaatgatgctatggaccatgctgagagagttctggtgatttataaacaattg
ctagcctaccatccttttaggtttacatttgtccgtgacttgctggcatatttttatggt
caacttccaggaaagctaattgtccgggtattgaatgtgctcgatattcccaagattccc
ttttcagagtcatttccacagcacattgcaccatcaaattcatctacatgccctcctcca
gattactttgcttccctgctgttgggtctagtaaataatgttattcctcccctcagtagc
agctctaagtcggggtctattttagatgcttcatacctttcagctcgctgtccaccaaac
aaaactcctgctacaaatcaatctgggcaaaccaatgtttctgaggttcagaaagccttt
tatcagattcaagatcctggaacatacactcagttggtgcttgaaacagctgtgatagaa
ttgctctctcttccagtttccgcttcccaaattgtgtcatcactcgttcagattcttgtg
gacatccaatctacccttattcagtctggcaacgggtttcatggaacttcaaatgtttcg
gggcaaacctctgttttacctacctctccttctggtggaagcacagattctatgaatgca
agccgatctgtagcaccagcttctggactaaatacttcgaattttgtttctcgtagtggc
tatacctgccaacagctgtcttgcttgctgattcaagcttgtggtcttctactagctcag
cttccacaggatttccacatacaactttatcttgaggtgtctcgtcttgttaaagagtgc
tggtggctcactgatgggaagaggtctcctagtgagttagattcagctgttaattatgct
ttattggatccgacatgggctgctcaagacaatacttccacagcaataggaaacatcatt
ggtttgctccactcgttctttagcaacctaccgcaagaatggctagagaaggcccatgta
atcattacacaactcaggccaataacttcagtggctatgttgagaatagtcttccggata
atgggtccattgctcccaagactggcaaatgctcatactctcttcaacaagactctctct
ctgctacttaaggcattggtagatgtctttgggataaatgcacaaccatcagtgcctgct
caagcgtcagagataattgatctcattgacttcctgcaccatgttatacattatgagggg
caaggtgggcctgtgcagcctactagtaaacctagatcagatgttttagtactcttcagc
agggccttggaaagtttgcgaccagatgtacggcatcttttatctcacttaacaacagat
tttaattcatccatttatgcttctactcatccgaagcttgttcagagtcccatgtcctaa
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integrated database retrieval system
