Amaranthus tricolor (tampala): 130807545
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Entry
130807545 CDS
T09367
Name
(RefSeq) RNA-binding motif protein 25 isoform X1
KO
K12822
RNA-binding protein 25
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130807545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atri03041
]
130807545
Spliceosome [BR:
atri03041
]
Complex A
U1 snRNP components
U1 related factors
130807545
Complex B
130807545
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PWI
RRM_1
Motif
Other DBs
NCBI-GeneID:
130807545
NCBI-ProteinID:
XP_057528779
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All DBs
Position
3:36330263..36338677
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AA seq
921 aa
AA seq
DB search
MADSSPSPATTTQSPSNPPPSQSPILNANPNSTIPVSESQPNLTQPPSSTPPPPPAITVN
LNPNPTSAPPFVPPQINPYAVPPSFRPTSGPGPMPVPQFTPIPQNPNIQGFPTQQVLAQP
NHGVPPPGVTSAPPQQIPMMPGQPTLRPPFVAMPNGYMQPPNLPPGMVRYPYPSIVRPPY
IARPGVSVGSVPPLPRPPFVGLRPPVISPVVRPPVLPLVVIPAEKPQTTVYVGKIASSVE
NDFIRSLLELCGPIKSWKRAQDPSDGTPRRFGFCEFESAEGVLRALRLLSKCNVDGEELV
LNVNQATREYLERYVQKKKENLNKPGETGAEEVKKEGDSAPDTEKSEGNEKKEPAEAAVE
DSKKVLIETENKENDIANFGLVSDEDRIADRDALDKLTNMIEERIKTKPPPPPPPPAQKV
TDGPTNSNSEMPAKSEDKDTNIDASKNEEKHDDGLKSDTKPINRAGTESPDRSRRYDNRI
RERERDRERRERERELERLERERERERERRGRERELEIQKVERFYKERVKEWEAREKEKE
YERKREREKEKERERERRRLIAEQEDESDDDSRKRRRKSEIEDKRRRRRREKEEDLADRF
KEEEELVEAKKRAEEEQLRQQEKEALELSSVPAANGVGKPVCPEAADSEMNDDMEPSHET
DSVPANHTGDGAVENGSTDEPMMESGSVPDVKLTGNAPGKKLEFGLVGSGKRTTVPSVFH
EEEDDDSQKEKKMRPLVPIDYSTEELQAVQTNDGEAPPISVASDDTGKRIISKDVKSDAE
RNRNRRQHDRPSHRERDHERGDDEAPRAREILDAKKLIDMIPKTKDDLFSYEVNWAVYDE
NRLHERMRPWISKKITEFLGEEETTLVDFIVERFREHVKAEKMLDVLQRILDEEAEMFVL
KMWRMLIFEIKKVETGLTARS
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atggcggattcatccccatcaccggcgacaacgactcaatctccatccaatcctcctccc
tcacaatccccaattttaaacgctaaccctaattctacgattccggtttccgaatcgcaa
cctaatttaactcaaccaccttcttctactcctccgccacctccagcgattactgttaac
cttaaccctaaccctacatccgctcctccgtttgttcctccgcagatcaacccttatgcg
gttccaccttcatttcgacccaccagtggtccgggtccgatgccagttcctcagtttact
cctattcctcagaaccctaatattcaagggtttccgacgcaacaagttttggcgcagcct
aatcatggtgttccgcctccaggagttacttctgcgccgccgcaacaaattccaatgatg
cctggacaaccgactcttcgaccgccttttgtggctatgcctaatggttatatgcaacct
cctaatcttcctcccggaatggttcgttatccttatccgtcgattgtgcgtccgccttat
attgctcgtcctggtgtctccgttggctcagttcccccacttccaaggcctccttttgtg
ggacttcgtccccctgtgatttctccagttgtcaggcctcctgttcttcctttagttgtt
atacctgctgagaaaccccaaacaactgtttatgtaggcaagattgcttcttcagtggag
aatgattttattcgttcgctacttgagttatgtggaccgattaagagttggaagcgtgct
caggatccgtctgatggaaccccaagaagatttggattctgtgaatttgagtctgctgaa
ggtgttcttcgtgctctacgtctgctgagtaaatgcaatgttgatggtgaagaactggtg
ctgaatgttaatcaagcaacaagagaatatttagaacgttacgtgcagaagaagaaagag
aatttgaataaacctggtgagactggagctgaggaggtgaagaaagaaggagatagtgca
cctgataccgaaaagagtgaaggcaatgaaaagaaagagcctgctgaagcagctgtggaa
gattccaagaaggttttgattgagactgaaaacaaggaaaatgatattgcgaattttggt
cttgtttctgacgaggatcgtattgctgatcgagatgctttggataagctcactaatatg
atagaagaacgcataaagactaagcctccacctcctcctcctccaccagcgcagaaggtt
actgatggcccgactaactcaaactctgaaatgcctgctaaatctgaagacaaggacaca
aatattgatgcttcaaaaaatgaagaaaagcacgacgatgggttgaaaagtgatactaaa
cctattaacagagccggaactgaatcccctgataggagtagacgatatgataatcgtatc
cgagaaagggaaagagaccgtgagcgacgggagagggagagagagcttgagagattagag
agagaacgagagcgtgaaagggaaaggagagggagggagagagagttagagattcaaaag
gttgaacggttctacaaagagcgagttaaggaatgggaggctagagaaaaggagaaagag
tatgagcgaaagcgtgaaagggagaaggagaaagagagggaacgtgaacggaggaggttg
attgctgagcaagaggacgaaagtgatgatgattctaggaaaaggagacgcaagtctgaa
attgaggataagaggaggcgacgacgtagggaaaaggaagaggatttagctgatagattc
aaagaagaagaggagcttgtggaggccaaaaaaagagctgaggaggagcagctgaggcaa
caagaaaaagaggcattggagttgtcttctgttccagcggctaatggtgttgggaagcct
gtctgtcctgaagctgctgacagtgagatgaatgatgacatggaaccaagtcatgagact
gattctgttcctgcaaatcatactggagatggggctgttgaaaatggcagtactgatgaa
ccaatgatggaatctggctcagttccagatgtgaagcttacaggcaatgcacctggcaaa
aagcttgaatttggtttggttggctcagggaaacgaacaactgtgccgtctgtctttcat
gaggaagaggatgatgattcccaaaaagaaaagaaaatgaggcctcttgttccgattgat
tacagtaccgaggaactccaagctgtacagacaaatgatggagaggcacctccaatttct
gttgcatctgatgatacaggtaagcgtattatctctaaagatgtaaagtccgatgcagaa
aggaataggaatcgacgtcagcatgatagacctagccatcgagagcgtgatcatgaacgt
ggtgatgatgaggcacctcgagctcgagaaattttggatgctaaaaaattgattgatatg
attccgaagactaaagatgacttgttttcgtatgaagttaattgggctgtatatgatgag
aatcgtttgcatgaaagaatgagaccctggatttcgaagaagattacagagtttctggga
gaagaagaaaccacattggtcgacttcatagtagagagattccgggaacacgtgaaggct
gagaaaatgctggacgtacttcaacggatcttagatgaggaagcggaaatgtttgtcctc
aagatgtggagaatgctcatctttgaaattaaaaaggtcgagacgggtttgacagcaaga
tcttag
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