Amaranthus tricolor (tampala): 130807681
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Entry
130807681 CDS
T09367
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri00040
Pentose and glucuronate interconversions
atri01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
130807681
Enzymes [BR:
atri01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
130807681
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
130807681
NCBI-ProteinID:
XP_057528966
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Position
3:35138784..35142867
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AA seq
403 aa
AA seq
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MAFHLSLLFLITLLSPIFIHSSHVQDPELIAQEVQRQIRNATTRRKLGYLSCGTGNPIDD
CWRCDHKWIQNRQRLADCAIGFGKGALGGKNGKIYVVTDNGDDAVNPKLGTLRWGVIQEE
PLWIIFQRDMVIKLKQELMMNSFKTIDGRGANVHIAGGPCITVQYVTNIIIHGINIHDCK
RGGNTMVRDSPSHYGWRTISDGDGISIFGGSHVWIDHCSLSSCTDGLIDAIHGSTAITIS
NNYLTHHNKVMLMGHSDSFTRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHW
EMYAIGGSAAPTINSQGNRFLAPNDPNNKEVTKREEWPQSEWKKWNWRSQGDLLLNGAFF
TASGAGSSSSYARASSLSARPSSFVASITMSAGVLNCKKGSHC
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggcatttcatctctccttgcttttcctcattactcttctttctcccattttcatccac
tcttctcatgtccaagatcctgaacttatagcacaggaagttcaacggcaaataaggaat
gctactactaggagaaaattaggatacctctcatgtgggacaggaaatccaatcgatgac
tgttggcggtgcgatcacaagtggattcaaaaccgccaacggttagcggactgcgcgatc
gggttcggaaagggtgcactagggggcaaaaatgggaaaatctacgtggtaacggacaat
ggggatgacgcagtgaacccgaaactaggaaccctacggtggggagtcatccaagaagaa
ccattatggatcatatttcaacgtgacatggtgattaaactaaaacaagaactgatgatg
aattctttcaagacaatcgacggtagaggagctaacgtccacattgcaggtgggccatgc
ataacagtacagtatgttacaaacattataattcatggaataaatatacatgattgtaaa
cgaggaggaaatactatggtgcgggactccccatcgcattatgggtggagaacaatatca
gatggtgatgggatctcaatctttggtggtagtcatgtttggattgatcattgttcactc
tcaagttgtacggatgggttaattgatgctattcatgggtcaactgctattaccatttct
aacaattacttgacccatcataataaggttatgttaatgggtcatagtgattcttttact
agggataaaaatatgcaagttactattgctttcaatcattttggtgaaggattagtccaa
agaatgccaaggtgtagacatggatattttcatgtggtgaacaatgactatacacactgg
gaaatgtatgcaattggaggaagtgcagctcctacaataaacagtcaaggcaacagattc
cttgctcctaatgacccaaataacaaagaggtaacgaaacgagaggaatggccgcaaagt
gaatggaagaaatggaattggagatcgcaaggagatttattactaaatggagcatttttc
acagcttcaggggcaggatcttcttcaagctacgcaagggcatctagtttaagtgcaaga
ccttcttcttttgtagcatcaattacaatgtcagctggtgttcttaattgcaagaaaggc
tctcactgttag
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