Amaranthus tricolor (tampala): 130807788
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Entry
130807788 CDS
T09367
Name
(RefSeq) paired amphipathic helix protein Sin3-like 3 isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
atri03036
]
130807788
Chromosome and associated proteins [BR:
atri03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
130807788
REST complex
130807788
Heterochromatin formation proteins
Other heterochromatin formation proteins
130807788
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH
Sin3a_C
Sin3_corepress
PAH_ZNF598
HHD_RTEL1
Motif
Other DBs
NCBI-GeneID:
130807788
NCBI-ProteinID:
XP_057529105
LinkDB
All DBs
Position
3:37146094..37155561
Genome browser
AA seq
1371 aa
AA seq
DB search
MKRSRDDVYTGTQVKRPQPANSFRGETSGQPQMVGGGGSGAAAPQRLTTNDALAYLKAVK
EMFQDKKEKYEEFLEVMKDFKAQRIDTTGVIARVKELFKGHRNLILGFNTFLPKGYEITL
PPEDDPPAKKPVEFEEAISFVNKIKARFQGDDRVYKSFLDILNMYRKENKTISEVYQEVA
TLFQDHRDLLEEFAHFLPDTSAAAPGQHGPGRNSILRDRMPSTKPMHFDKKDQDINVGCS
DLDNDKLMEVEREQRRRVDKERDKKDVVHRDEDSVTDQGAENCGPRVPGSYDDKNSLKSM
YSQEFAFCEKVKETLHSPEDYQEFLKCLHIYSRDIITRQELHSLVGEILGTYLMEGFDEF
LTRSEKIDGFLGSVISKKSLWPESLSSDGPSKSVKAEDRDQGEIGRYDRDRDRESRERDR
TDRSALYGNKEVANLRMSLNSNKDKYIGKPIQELDLSNCERCTPSYRLLPKNYPIPMASH
RTDLGAKVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNITIKR
VEDILDKINSNIIKTENPIRIEDHFTSINLRCIERLYGDHGLDVMDVLRKNAILALPVIL
TRLKQKQEEWARCRADFNKVWAEIYAKNYHKSLDHRSFYFKQHDTKSLSTKALLAEVKEI
SEQKGKEDDVLAVAAGNKRTIVSHMEFEYPDAEIHEDLYQLMKYSCGEVCTAEQVDKVMK
IWTTFLEPMLGVPARAHGAEDSEDAVRVKEDIRAEDPATGESDRSPDGSAAIHKHEGSPP
EQSSSGNHAKDNGYPDGSSNALHQGRTQSNSNMVDQISSLGKQPTSNEQLSTTRASLPYG
VEQFHGRNVENSSGHIATLSRVGNTADDIGLESRSNGGNLTSMEVADSSKPLTTSNGVPG
ANKDVKYCELSNGHTKAEREEGELSPNGDFEEDNFALYGNAATEPANKPNDGASNAPRPS
RQRREAHDGEAGGENDVDVDDEGEESAHRSSEDSENVSENGDVSPSESGEREDCSPDQDE
VEHDENDNKAESEGEAEGMADAQDGDGTSLPPSERFLQTVKPLVKHVPTALNERTKSSRI
FYGNDSFYVLFRLHQTLYDRIQSAKINSSSGDRKWKCSLETVPTDLYSRFMNALYSLVDG
SSDNTKFEDDCRAIVGTQSYLLFTLDKLIYKLVKQLQILATEEMDNKLLQLYAYESSRKP
ERFLDVVYHENARVLLHEENIYRIECSSSPTRLSIQLMEKGHEKPEVSAVSLDPTFSAYL
HNEFLSVVPDKKEKTGIFLKSRSKRQHTSGDEISSASFVMEGVQVVNGLECKIACNSSKV
YYVLDTEDFFYRKIRNRRTLRVSSACNDQAKSQKGSSRRLDPFSRLLSSSQ
NT seq
4116 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggtctagagatgacgtttacacggggactcaagtcaaacggcctcaacctgct
aattcgttccgtggtgaaacttctgggcagcctcaaatggttggaggtggcggaagtggt
gcggctgcgccacaaaggttaacgactaatgatgccctagcttatctgaaggcagttaag
gaaatgtttcaagataaaaaagagaaatacgaagagtttttggaagttatgaaggatttc
aaagctcagaggattgataccacaggtgtaattgcaagagttaaagaattgttcaaaggg
catcgcaacttaattctagggtttaatacctttttgcctaaaggttatgaaattaccctt
cctcccgaggatgatcctcctgcaaagaagccggttgaatttgaggaagcgattagtttt
gtcaacaaaattaaggcgcgtttccaaggtgatgatcgtgtttacaagtcatttcttgac
attctaaacatgtatcggaaagaaaacaagaccattagtgaggtctaccaggaggtggct
acgctcttccaagaccatcgagaccttcttgaggaatttgctcattttcttcctgatact
tcagcagcagcaccaggtcaacatggacctggtagaaattctattttgcgggacaggatg
cctagtacaaagccgatgcattttgacaagaaggaccaggatatcaacgttggttgctct
gatctcgacaatgataaactgatggaagtagagcgagagcaaaggagaagggttgacaaa
gaacgagacaaaaaagatgttgtacacagggatgaagactctgttacagaccaaggtgct
gaaaactgtggaccgcgtgttcctgggtcttatgatgataagaattctctaaaaagtatg
tacagccaagaatttgcattttgtgaaaaagtcaaggagacattgcatagtcctgaggat
tatcaggaatttttaaaatgtcttcacatatatagcagggatattatcacaagacaagaa
ttgcattctttggtgggtgaaatacttggaacatatctcatggagggatttgatgagttc
ttgacacgtagtgagaaaattgatggttttcttggtagcgttataagtaaaaaatctttg
tggccagaatctctgtccagcgacggtccatcaaaatcagtgaaagctgaggatagggat
caaggagaaattggaagatatgatagggatagagatcgcgaaagcagagaaagggatcgc
actgatagaagtgctctttatgggaacaaagaagttgcaaacctgaggatgtctttaaat
tcgaacaaggacaagtatataggaaaacctatacaagagcttgacctctccaattgtgaa
cgctgcacgcctagttatcgacttcttcccaagaattatcccatacctatggcaagccac
agaacagatcttggagctaaagtgttgaatgatcattgggtctctgtcacttctggaagt
gaggattattcatttaaacacatgcggaaaaatcagtatgaggagagccttttccgatgc
gaagatgacaggtttgagctagacatgctgttggagtctgtgaatattacaattaagcgt
gtggaggacattttggataaaatcaactccaacataattaaaacagaaaatcctattcgg
atagaggatcactttacatctataaatttaagatgcatagaacgattgtatggggaccat
ggtcttgatgtcatggacgtgttgagaaaaaatgcaattcttgctttgcctgttatattg
actcgtttgaaacaaaaacaagaagagtgggccagatgccgagctgatttcaataaggtg
tgggctgaaatatatgctaaaaattatcacaaatcacttgatcatcgtagcttttacttc
aagcagcatgacacaaagagcttgagtacaaaagctttattggcagaggttaaagagatc
agtgagcagaaaggcaaagaggatgatgtacttgctgttgccgctggaaacaaacgaacc
atcgtttcccatatggaatttgagtaccctgatgcagaaatacatgaagatttgtatcaa
ctcatgaaatattcctgtggtgaagtttgtacggctgaacaggttgataaagtgatgaaa
atctggacaacttttctcgaacccatgcttggtgtgcctgctcgagctcatggtgcagaa
gactctgaagatgctgtgagagtcaaggaggatatcagagccgaagaccctgctactggt
gagagtgatagaagccctgatggttctgctgctattcacaaacatgaaggtagtccaccg
gaacaatccagttctggcaatcatgcgaaagataatggatatcctgatggcagtagcaat
gccctgcatcaaggtagaacacagagtaacagcaacatggttgatcagatatctagtcta
ggaaaacaacccacttccaatgaacaattaagcactactcgtgcgtctcttccatatgga
gttgagcaatttcatggaagaaacgttgaaaactcttcaggtcatattgctacactatca
agagttggaaatacggcagatgacattggtcttgagtcgagatctaatggtggaaatttg
acttcaatggaggttgctgattcttctaagccacttaccacatcaaatggagtgccagga
gccaacaaagatgttaaatactgtgaattgtctaatggacatactaaggctgaaagagag
gagggtgagttgtctccaaatggagattttgaggaagataattttgcactttatggaaat
gcggcaacagagcctgctaataagccaaatgacggtgcttcaaatgcaccacgtccaagc
agacagagacgtgaggcacatgatggtgaggctggaggtgaaaatgatgtagatgttgat
gatgaaggcgaggaaagtgctcacaggtcatctgaggacagtgagaatgtttcagagaat
ggggatgtttcccccagtgaatctggtgagagagaggattgctctcctgatcaagatgaa
gtagaacatgatgagaatgataacaaggcagagagtgaaggtgaggctgaaggaatggca
gatgcacaagatggagatgggacatcattgcctccctcagaacgctttctgcaaacagtg
aagcctcttgtaaagcatgtacctacagctttaaacgaaagaacaaagagttcccgcatc
ttctatggcaatgattccttttatgtgctctttagactacatcaaactctgtacgataga
atacaatcggcgaagattaactcgtcttctggtgacaggaaatggaaatgttcacttgaa
acagttccgactgacctgtattcaaggtttatgaatgcactatatagtttggttgatggt
tcatctgacaatactaaatttgaggatgattgccgagcaattgttggtacccagtcatat
cttctgttcactttagacaaactcatatacaagcttgtcaaacagcttcaaatattggcc
actgaggaaatggacaacaagcttcttcagttatatgcatatgaaagctctagaaaacca
gagcgattcttggatgtcgtttatcacgaaaatgctcgtgttttacttcatgaggagaac
atataccgcattgaatgctcatcctcaccgactcgcttgtctattcaattaatggagaaa
gggcatgaaaaacctgaagtttcagctgtgtcattggaccccactttttcagcctatcta
cataatgaattcctctcagtcgtcccagataagaaagagaagactgggatttttctaaag
agcaggagtaaacgccagcatactagtggagatgaaatctccagtgcttcctttgtcatg
gaaggagttcaagttgtcaatggtttagagtgcaagatagcttgcaattcgtccaaggtg
tattatgtattagacactgaagatttcttttaccggaagataagaaataggagaactttg
cgtgtgagcagtgcttgcaatgaccaggcgaagtcacaaaagggctcttctcgcagatta
gatccttttagcagattgctttcgagctcacaatga
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