Amaranthus tricolor (tampala): 130808029
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Entry
130808029 CDS
T09367
Name
(RefSeq) farnesyl pyrophosphate synthase 1-like
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri00900
Terpenoid backbone biosynthesis
atri01100
Metabolic pathways
atri01110
Biosynthesis of secondary metabolites
Module
atri_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
130808029
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
atri01006
]
130808029
Enzymes [BR:
atri01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
130808029
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
130808029
Prenyltransferases [BR:
atri01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
130808029
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
130808029
NCBI-ProteinID:
XP_057529447
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All DBs
Position
3:1348909..1354755
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AA seq
342 aa
AA seq
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MLDLRSKFLQVYQVLKSELLSDPAFDWTDTSRQWVDRMLDYNVPGGKLNRGLSVIDSYKL
LKDGEELTEDEIFLASALGWCIEWLQAYFLVLDDIMDNSHTRRGQPCWFRVPKVGMIAVN
DGVILRNQIPRILKKHFRDKKYYVDLMDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSV
DLHRRIVQYKTAYYSFYLSVACALLMSGEKLEDHIDVKNILIDMGIYFQVQDDYLDCFGD
PKFIGKIGTDIEDFKCSWLVVKALELCNDKQKKVLYDNYGKEDPDCVAKVKELYNVLDLK
GVFEKYESQSYEKLIKSIEAHPSTAVQAVLKSFLAKIYKRLK
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgttggatcttaggtcaaagtttctgcaagtttatcaagttcttaaatctgagcttctt
agtgaccctgcttttgattggaccgatacttctcgtcaatgggttgatcggatgctggat
tacaatgttccaggagggaagctgaatcgggggctttctgttattgacagctacaagctg
ttgaaagacggagaagagcttactgaggatgaaatttttcttgcttctgcactagggtgg
tgcattgaatggcttcaagcatattttcttgtccttgatgacattatggacaactctcat
acaaggcgcggtcagccttgctggttcagagttccgaaggttggcatgattgctgttaat
gatggtgtaatacttcgaaaccaaatcccaaggattctcaagaaacatttcagggacaag
aagtactatgtggacttgatggatttgtttaatgaggtagaatttcaaactgctagtgga
cagatgattgatctgatcaccactattgaaggagagaaggatctttcaaaatattcggtt
gacctccaccgtcgcattgttcagtacaaaactgcttattactcattttatctatctgtt
gcttgtgctttactcatgtctggtgagaagcttgaagatcatattgatgtcaaaaatatt
ttgattgatatgggaatatatttccaagtgcaggatgattatctcgattgttttggagac
ccgaaattcattggcaagatcggaactgatattgaagattttaagtgctcttggttggtt
gtgaaagctctagaactttgtaatgacaaacaaaagaaagttttatatgacaattacggc
aaagaagatcccgactgtgttgcaaaagtaaaagaactctataacgtactcgatcttaag
ggtgtatttgagaaatacgagagtcagagctacgaaaaactgatcaaatctattgaagcg
catccgagcacggcagtgcaagctgttttgaaatcgttcttggctaaaatatacaagagg
ctgaagtga
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