Amaranthus tricolor (tampala): 130808068
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Entry
130808068 CDS
T09367
Name
(RefSeq) DNA topoisomerase 1 alpha-like
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
atri03032
]
130808068
Enzymes [BR:
atri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
130808068
DNA replication proteins [BR:
atri03032
]
Eukaryotic type
DNA Topoisomerases
130808068
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I_N
Topoisom_I
Topo_C_assoc
Fn3_PTPRU
RodZ_C
Motif
Other DBs
NCBI-GeneID:
130808068
NCBI-ProteinID:
XP_057529497
LinkDB
All DBs
Position
3:1963601..1972585
Genome browser
AA seq
993 aa
AA seq
DB search
MSVEACINPKMVAEDSDDDDTPLIFSRRKPTQLSSVLKNSSPSVRHEKQPLKPSSDIRNN
NDRTSSALKGKTASLSKPSSSKPNLGAQKSPPPSSKPLKPLPSSTRPSPSPPTSARPSPS
PPSSARAAPSQPPLSSRPSSSLPSSARPSPSPPPSSRPSPSPLPSTSRPSPSVPQSRAPP
VKSPSTNGASLGNHQSRKDNHAKEQKRAPIAVKEEKVVKHTSDESDDSDDDKLLSARCSV
GLQKGNAEIKPTKSDYVDSDDEKPLSSRMDKGRAVAGASQTQKSKTGSVKSPDDSDDDKP
LSSNMRKNNSGTHCKYDDSNEHKPLISRLQQNGSIKRENQSKVPSNSIKRPSEASVGQPS
MKKAKLTASSTSGNVRQIPLKSDVKDDDDHVPIGQHMNKAGSTSKSVPVKKAAKFDSSKL
KVNKNSKKIMKQSQYSKSSKELPSSGDGQKWTTLVHHGVIFPPPYKPHGVKMLYDGKPVD
LTPEQEEVATMYAVMLETDYVKKKKFNENFFGDWKKILGKNHVIQDFSKCDFQPIYEWHL
GEKEKKKQMSTEEKKAIKEEKLKLEEKYMWAILDGAKEKVGNFRVEPPGLFRGRGEHPKM
GKLKKRIYPSDITINIGKDAPIPECPIPGQRWKEIRHDNTVTWLAYWNDPINPKMFKYVF
LAASSSLKGQSDKEKYEKARKLKDYIQGIRSAYTKDFTSKDMTKKQIAVATYLIDRLALR
AGNEKDDDEADTVGCCTLKFENVKPIPPNILEFDFLGKDSIKYYKQFEADPRVYKAVEDF
REGKKVGDDLFDELDTSKLNAHLKELMPGLTAKVFRTYNASFTLDDMLAKGAGSGEVPEK
IAIYQHANKEVAIICNHQRTVSKSHSSMMERLATKIEAAKIELKELEADLVRAKKGKPPL
KDSSGKQKRNLSPEAIEKKIISTKAKIEKQERDMQSKEDLKEIALGTSKINYCDPRITVA
WCKRNEVPIEKMFNKSLLEKFSWAMDCDPSFRF
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttgaggcttgtataaacccaaaaatggttgccgaggatagtgatgatgatgac
acacccttgatttttagtagaagaaagccaactcaattaagctcggtattgaagaattca
tcaccctctgtgagacatgaaaagcagccattgaagccaagttcagatattagaaacaat
aatgatcgaacttctagtgcattgaaggggaagacggcttctttgtcgaaaccgtcatct
tctaaacccaatcttggagctcaaaaatccccacccccatcgtcgaagcccttaaagcct
ttaccttcatcaactagaccttctccgtctccaccaacttcagctagaccttctccatct
cctccttcttcagctagagctgctccttctcagccgcctttgtcaagtagaccttcttca
tctctgccttcttcagctagaccttctccatctccgcctccttcatcgagaccttctcca
tctccgcttccttcgacaagtagaccttctccatctgttccacaatccagagccccacct
gttaagtccccttccaccaatggagcttctttgggaaatcaccagtcaagaaaggataat
catgccaaagagcagaagcgtgcacccattgcagttaaagaggaaaaggtcgttaagcat
actagtgatgagtctgatgattccgatgatgataagctacttagtgcaaggtgttctgtt
gggttacagaagggaaatgcggaaattaagcccactaaaagtgattatgtggattctgat
gatgaaaagccacttagttcgaggatggataagggaagggctgttgctggagcatctcaa
actcagaaatcgaagacggggagtgtgaaatcaccagatgattcggatgatgacaagcca
ttgtcgtctaacatgaggaaaaacaacagcgggacacattgcaagtatgatgattcaaat
gaacataagcctttgatttctaggctacaacaaaatggatcgatcaagagggaaaaccaa
agtaaggtacccagtaattcaattaaaaggccttcagaggcctctgttggtcaaccttct
atgaaaaaagcaaaacttactgcttcatccacctccggtaatgttaggcaaataccactg
aaatccgatgtcaaagatgatgatgaccacgttccaataggtcagcatatgaataaagct
ggatcaaccagtaaatcagtgcctgtgaaaaaggctgctaaatttgattcttcaaagttg
aaagtaaacaagaattcaaaaaaaataatgaagcaatcacaatactcgaagtcttcaaaa
gagttacctagttcaggtgatgggcagaaatggacaaccttagttcatcatggtgttata
tttcctcctccatataagcctcatggggttaagatgctgtatgacggtaaaccggttgac
ctcacacccgagcaagaggaggttgcgactatgtatgcagtgatgcttgagactgattat
gtaaagaagaaaaaatttaatgaaaacttttttggtgactggaagaaaattcttgggaag
aaccatgtaattcaggattttagcaaatgtgattttcagcccatatacgaatggcatctg
ggggaaaaggagaaaaagaagcaaatgagtactgaagagaaaaaggcaataaaagaagag
aaattgaaactagaagagaagtatatgtgggctattcttgatggcgccaaagaaaaggtt
ggcaactttagagttgaaccccctggtttatttaggggccgtggcgagcacccaaagatg
ggaaaacttaaaaagcgtatttatccaagtgacattacaataaatataggaaaggatgct
ccaattccagaatgtcctatccctggtcagagatggaaagaaataaggcatgacaacaca
gtgacatggttagcttattggaacgatcccataaacccgaaaatgttcaagtatgtattt
ttggcggctagcagttcactgaaagggcaaagtgacaaggagaaatatgagaaagcaagg
aagttaaaggactacattcaaggtattagatcagcttacacgaaggattttacgagcaaa
gacatgaccaaaaaacaaatagctgttgctacctatctcattgatagacttgctctgagg
gctggtaatgagaaggatgacgatgaagcagatactgttggctgttgtacattgaaattt
gaaaatgtgaaaccaattccgcctaatatattggagtttgatttccttggtaaagattcc
atcaagtactacaagcaatttgaagcagatcctcgtgtgtacaaagctgtcgaggatttc
agagaagggaagaaggttggtgatgatctctttgacgagttagacactagcaagctgaat
gctcatctgaaagaactgatgcctggtctcactgcaaaagtgtttcgtacctataatgca
tctttcactttggatgacatgcttgccaaaggagctggaagtggagaggtgccggagaaa
attgccatatatcagcacgcaaacaaagaggtagcaatcatttgtaatcatcaacgtaca
gtatcaaaatctcattcttccatgatggaaagacttgccacgaaaatagaagcagcgaag
attgagttgaaagaattggaagcggatttggttcgtgctaagaaaggcaagccaccattg
aaggatagtagtggaaagcaaaagagaaatttgtccccagaagcgattgagaagaagata
atatcaacgaaggcaaaaatagaaaaacaagagcgtgacatgcaatccaaagaggatctc
aaagaaatagctctcggtacatcgaagatcaactattgtgatccacggattacagttgca
tggtgcaaaagaaatgaagtcccgatcgaaaaaatgtttaacaagtctctgctggaaaag
ttctcatgggctatggattgtgatcccagcttcagattttga
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