Amaranthus tricolor (tampala): 130808216
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Entry
130808216 CDS
T09367
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit E-like isoform X1
KO
K03250
translation initiation factor 3 subunit E
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
atri03012
]
130808216
03051 Proteasome [BR:
atri03051
]
130808216
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
atri04147
]
130808216
Translation factors [BR:
atri03012
]
Eukaryotic type
Initiation factors
eIF-3
130808216
Proteasome [BR:
atri03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
130808216
Exosome [BR:
atri04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
130808216
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF3_N
PCI
EIF3E_C
RPN7
COG6_N
TPR_19
DUF4606
TPR_14
DUF5818
Motif
Other DBs
NCBI-GeneID:
130808216
NCBI-ProteinID:
XP_057529671
LinkDB
All DBs
Position
3:11334522..11342061
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AA seq
437 aa
AA seq
DB search
MANYDLTPRISPHLDRHLVFPLLEFLQERQFYPEEQLLKAKIELLNNTNMVDYAMDIHKS
LYRLDDVPQDMVDRRVEIVARLKALEEGAAPLVAFLQSEDKVQELRADKQYNLQMLNERY
QIGPEQIEALYQYAKFQFECGNYSGAADFLYQYRALCTNSERRLSALWGKLAAEILMQNW
DIALEELNRLKEIIDSKAFTSPLNQVQSRIWLMHWSLFIFFNHDNGRTQIIDLFNQDKYL
NAIQTNAPHLLRYLATAFIVNKRRQPQFKDFLKVIQLEQNSYKDPITEFLACVSGNYDFD
EAQKKLRECEDVILNDPFLGKRVEEGNYTTVPLRDEFLENARLFICETYCKIHQRIDMGA
LVGKLNLSYEEAERWILMLIRTSKLDAKIDSKSGTIVMEPNCPNVYEQLIDHTKALSMRT
YKLAGQLLEQGHPQAAR
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggcgaactacgatttaacgccgagaatatcgccgcatctcgatcgccatctcgtattt
cctttacttgaatttcttcaagaacgtcaattttaccctgaggaacaacttctcaaggct
aagatcgagcttcttaacaatactaatatggtcgattatgccatggacatccacaagagc
ctttaccgccttgatgatgttcctcaagatatggtggataggagagttgaaatagttgcg
aggttgaaggcattggaagaaggtgctgctcctttggttgcttttcttcagagtgaggat
aaagttcaggaattacgtgctgataaacagtataatcttcaaatgcttaatgaacgttat
cagataggtccagagcagattgaggcattgtatcaatatgcgaaattccaatttgaatgt
gggaactattctggtgcagcagattttctctatcagtaccgagctctttgcacaaacagt
gaacgacgcctcagtgccttgtggggaaaacttgcagctgaaattttaatgcaaaactgg
gacattgctcttgaggaactcaaccgtttgaaagagataatcgattctaaggctttcaca
tcacctttgaatcaggtgcaaagtagaatatggctgatgcattggagcttattcatcttc
tttaaccatgataatggcaggacacaaataattgacctttttaatcaggataaatatctc
aatgctatacaaacgaatgctcctcatcttttgcgttatcttgcaactgcattcattgtc
aacaagagaagacaacctcaattcaaagatttccttaaggtcatccagctggagcaaaac
tcatacaaagatcctatcactgaatttttggcttgtgtttctggcaactatgactttgat
gaggcgcaaaagaagttgagggaatgtgaagacgtcatattaaatgatccattccttgga
aaacgagttgaggaaggcaattatacaactgttccgttaagggatgagttccttgaaaat
gctcgccttttcatttgtgaaacgtattgcaagatacatcagcgtattgacatgggagct
cttgtgggaaaattgaatttaagttatgaagaagctgagaggtggattttgatgctgata
cgcacttctaagcttgatgccaagattgattctaagtcaggaaccatagtgatggagcca
aattgcccaaatgtgtatgagcagctcatagatcacactaaagcattgtcaatgcgcaca
tacaaattagccggccaacttctcgaacaaggacacccacaggcagcgcgatag
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