KEGG   Amaranthus tricolor (tampala): 130808980
Entry
130808980         CDS       T09367                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
atri  Amaranthus tricolor (tampala)
Pathway
atri03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:atri00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    130808980
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:atri03019]
    130808980
   03041 Spliceosome [BR:atri03041]
    130808980
Messenger RNA biogenesis [BR:atri03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     130808980
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     130808980
Spliceosome [BR:atri03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    130808980
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 Nup35_RRM_2 RRM_RdRP1_2 BRAP2
Other DBs
NCBI-GeneID: 130808980
NCBI-ProteinID: XP_057530545
LinkDB
Position
3
AA seq 380 aa
MESREADANYGAQAEPHVNDDIHHNHDDGERSQPRSGDGASAGKIFIGGLARETTSVQFV
KHFGKYGEITDSVIMKDRRTGQPRGFGFITYADPSVLDKVIQDTHVINGKQVEIKRTIPK
GAIGSKDFKTKKIFVGGIPTSINEDEFRDFFSKFGDVTEHQIMRDHSSNRSRGFGFVTFD
SEESVDDLLSKGNRIEFAGTQVEIKKAEPKKPNLPAPSRRYNDSRSSHGGAFGDDAYGGY
EGGGFGPASYRAGAGYGARAGGYGGGYGGPDFGGYGGYGAGAMGPYRGDLSYGYSGRYGS
GGFSRGGYEMGSGYGGPGDGYGGYGGSGSGSGYGGGYDSAMGSSYGGSSGGSMYGSGSSG
RGGFSGGGAAANGRYHPYSR
NT seq 1143 nt   +upstreamnt  +downstreamnt
atggagtccagagaagcagatgccaactatggtgctcaggctgagcctcatgttaacgac
gatatacatcataatcatgacgatggtgagaggtctcagcctcgttctggcgatggagct
agtgctggaaaaatattcataggaggtttagctagagaaacaacttctgtccaatttgtc
aagcattttggcaagtatggtgaaatcacagattctgtaataatgaaggatcggaggacc
ggtcaaccacgtggatttggcttcatcacttatgcagatccttctgtattggataaagtc
attcaggatacccatgttataaatgggaaacaagtagaaatcaagcgaacaataccaaag
ggtgcaatcggatctaaggatttcaaaacaaaaaagatatttgtgggtggaattccaaca
tccattaatgaagatgagttcagagacttcttttccaaatttggtgatgtaacagagcac
caaataatgcgtgaccattcttcaaatcgttctcgtggctttgggtttgtgacattcgat
tcagaagagtctgttgatgatcttttgtcgaagggaaacagaattgagtttgctggaact
caggtggagattaagaaggcagagccaaagaaaccaaatcttcctgcaccctccagacgt
tataatgattcgaggtcttcccatggtggggcatttggtgacgatgcatatggcgggtat
gaaggtggtggatttggtcctgcttcctatcgagctggtgcaggatatggggcaagagct
ggtggatatggtggtggatatggtggtcctgattttggcggttatggaggatatggtgca
ggtgccatgggtccttacaggggagatctctcgtatggatattctggccgttatggcagt
ggtggcttcagtagaggaggttatgagatgggcagtggttacggtgggcctggcgatggt
tatgggggttatggtgggtctggatcgggaagcggatatgggggaggttacgattctgcc
atgggaagcagctatggaggcagcagtggtggttccatgtatggcagtggaagtagcggt
agaggaggatttagtggtggcggcgcagcagcaaatgggcgctatcatccatattccagg
tag

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