Amaranthus tricolor (tampala): 130809120
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Entry
130809120 CDS
T09367
Name
(RefSeq) rhamnogalacturonan I rhamnosyltransferase 1-like isoform X1
KO
K23280
rhamnogalacturonan I rhamnosyltransferase [EC:
2.4.1.351
]
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
atri01003
]
130809120
Enzymes [BR:
atri01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.351 rhamnogalacturonan I rhamnosyltransferase
130809120
Glycosyltransferases [BR:
atri01003
]
Polysaccharide
Structural polysaccharide
130809120
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
O-FucT
Motif
Other DBs
NCBI-GeneID:
130809120
NCBI-ProteinID:
XP_057530743
LinkDB
All DBs
Position
3:complement(33634106..33642030)
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AA seq
506 aa
AA seq
DB search
MGDDLEKDTKMEVRLDGFPQVRYGKIPVLPVVERTRLNGCFVKVCSSIVLWTVVFQLLVY
GVLWHPHFLNNFSHKLYPVTAVLPSPPPPPPRNYTSNGFLRVTCNGGLNQMRAAICDMVT
VARFLNLTLVVPDLDKTSFWADTSDFEDIFDMRHFIDSLRDEVRIIKRLPKRYGKKFGFN
PLVMQPISWSSEKYYFQQILPLFEKHRVIHFNKTDARLANNGLPLEIQRLRCRVNFQALK
FAPKIEALGKKLIRLLQAKGHFVALHLRYEMDMLAFSGCNHGCSEAEAKELKRMRYTYPW
WRDKEINSVEKRTQGLCPLTPEEITLILQALNFGNNTQIYIASGEIYGSERRLAALRAAF
PSIIKKDMLLDPNDLRQFRNHSSQMAALDFLVSVASDIFVPTYDGNMARLVEGHRRYHGF
KKTILLDRKRLVELIDLYQNGTRSWDYFAATVKMIHANRSGQHIHRNVIPDKPKEEDYFY
ANPLECLCQDPYCNDYIVSRNSSVLH
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgggcgatgacctggaaaaggacacaaaaatggaagttagattggatggttttccgcag
gtgaggtatggtaagattccggtgctgcctgtggttgaaagaacaagacttaatggctgt
tttgtcaaggtttgttccagcattgtcttgtggaccgttgtatttcagcttcttgtctat
ggagtgctatggcatcctcatttcctcaataatttctcccataaattgtatcctgtgact
gccgttcttccgtctcctccacctcctcctccaagaaactacacaagtaatggttttctg
agagtaacttgcaatggaggcttaaatcaaatgcgtgctgcgatatgtgacatggtgaca
gttgctcggttcttaaaccttactttggttgtcccagatctagataagacatccttttgg
gcagatacaagcgactttgaggacatctttgatatgagacatttcattgattccctaagg
gatgaggtccggatcattaagaggctaccaaaaaggtacgggaagaagtttggattcaat
ccgctggttatgcaacctattagctggtccagtgaaaagtattattttcaacagattctg
ccactttttgagaagcatagagtcatacattttaataaaacagatgcacgtttagcaaac
aatggacttcctcttgaaattcagagactcaggtgccgtgttaattttcaggctttgaaa
ttcgctcctaaaattgaggctctgggaaagaaattgatccgtctacttcaagcaaaggga
catttcgttgcgttgcatctgagatatgagatggacatgctagctttctcaggatgtaat
catggctgcagtgaggcggaagctaaggagctcaagcggatgaggtatacatacccatgg
tggagagataaggaaatcaactctgtggagaagaggactcaaggtttatgtcctcttaca
ccggaggaaataactttaattctacaggcgctgaattttggtaacaacacccaaatatac
attgcttctggagaaatttatggtagcgaaagaagacttgcagctctgcgtgctgcattt
cctagtattattaaaaaggatatgctacttgatccgaatgatttgcggcagttccgtaat
cattcttctcaaatggcagcattagattttttagtttctgttgccagtgatatatttgtt
ccaacttatgatggaaacatggcaaggctagttgaaggtcatcgcaggtatcacggtttc
aagaaaaccattttattggatcggaaaagacttgttgagttaattgatttatatcagaat
gggacgcgttcatgggattattttgcagctaccgtcaagatgatacatgctaaccggtca
ggtcaacacatacacaggaatgttattccggataaaccaaaggaggaggattatttttat
gccaatcccctggagtgcttgtgccaagatccttattgcaacgattatattgtctctcgt
aacagcagtgttttacattga
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