Amaranthus tricolor (tampala): 130809144
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Entry
130809144 CDS
T09367
Name
(RefSeq) valine--tRNA ligase, mitochondrial 1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
130809144
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
atri01007
]
130809144
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
atri03016
]
130809144
Enzymes [BR:
atri01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
130809144
Amino acid related enzymes [BR:
atri01007
]
Aminoacyl-tRNA synthetase
Class I (U)
130809144
Transfer RNA biogenesis [BR:
atri03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
130809144
Prokaryotic type
130809144
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
Val_tRNA-synt_C
FlxA
Motif
Other DBs
NCBI-GeneID:
130809144
NCBI-ProteinID:
XP_057530773
LinkDB
All DBs
Position
3:complement(33812557..33831612)
Genome browser
AA seq
1062 aa
AA seq
DB search
MVDPEVPTSAEDLERKKKKEEKAKAKELKKQKAALKAEVAKLQTQPTSTTKKTERKNIRK
DAEEEDPKHYLDPETSLGEKKKLSILMAKQYSPAAVEKSWYAWWEKSGFFVADSNSSKPP
FVIVLPPPNVTGALHIGHALTGAIEDTIIRWRRMSGYNTLWVPGMDHAGIATQVVVEKKI
MRERKQTRHDLGRERFVSEVWNWKNEYGGKILKQQRRLGASMDWSRECFTMDEKRSKAVT
EAFVRLYNEGLIYRDLRLVNWDCVLRTAISDIEVDYVDLKGREFRNVPGYVDPVEFGVLT
EFAYPLEENLGEIVVATTRVETMLGDTAIAVHPDDSRYKKLHGKVAIHPFNGRRIPIICD
EILVDPNFGTGAVKITPAHDPNDFEVGKRHKLEFINIFTDDGNINSNGGPDFAGMPRFKA
RVAVTKALEEKGLYRGAKDNEMRLGVCSRTNDVVEPLIKPQWYVNCSTMAKDALDAVMSD
DYKKIEIIPKEYTADWKRWLENIRDWCISRQLWWGHRIPAWYVTLENDQLKELGAYNDHW
VVCRNEEEAQAEAARRFTGQKFKIAQDPDVLDTWFSSGLFPLSVLGWPDETDDFKNFYPT
SVLETGHDILFFWVARMVMLGMKLGGDVPFKKVYLHPMIRDAHGRKMSKSLGNVVDPLEV
INGISLEDLHKRLEEGNLDPSELSRAKDIQRRDFPNGIPECGADALRFALVSYTAQADKI
NLDIQRVVGYRQWCNKLWNAIKFAMSRLGDAYTPPTTINPQVMPTSCQWILSVLNKAVGK
TVSSLEAYEFADAASAVYSWWQFQLCDVFIEVIKPYFVSSDESFASARGFARDTLWVCLD
SGLRLLHPFMPFVTEELWQRLPQPRDTIRKESIVISEYPSVVQSWTNENVEQHMELVESA
VKSLRSLKSLLPAKERNERRPAFALCRNVEVVDIIRSYELEILTLAGLSSLKILNEDDAV
PAGCSVDVVNANLSVYLKLKGTINAEVEREKLRKKMEETKRQKETLEKMMDASGYKEKVP
PQIHEENMAKLSKLMNEVLSLEEASQHLEHDIAAQAVVENDK
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atggttgatcctgaggtccctacatctgccgaagatcttgaaaggaagaaaaaaaaggaa
gaaaaggcaaaagcaaaagaattgaagaaacagaaggcagcgcttaaagcggaagttgcc
aaacttcagacacaaccaactagtaccactaagaagacagaaaggaagaacataaggaag
gatgctgaggaagaggatccaaagcattatttagatccagagacatcgcttggtgagaag
aagaagctttccattttaatggcaaagcaatattctcctgctgcagtggagaaatcatgg
tatgcatggtgggaaaaatctggcttttttgtggcagactctaatagctcaaaaccacct
tttgtgattgttcttccaccaccaaatgtcactggagcgcttcatattggccatgctctt
actggtgcaattgaggacacaatcatacgctggcggagaatgtctggatacaatacattg
tgggttcctggaatggatcatgctgggatagcaacacaggttgttgtggagaaaaaaatt
atgcgtgaaagaaaacaaaccaggcatgatcttggccgagaaaggtttgtatcggaggtt
tggaactggaaaaatgagtacggcggcaaaatcttgaagcagcagcgtcgtcttggtgca
tccatggattggtcgagagagtgttttacgatggatgagaaacgatcgaaggcagtaaca
gaagcatttgtaaggttgtacaatgagggccttatatatagggatcttcgattggtaaac
tgggattgtgtgttgagaactgcaatatctgatatcgaggtggattatgttgatctgaaa
ggaagggaattcagaaatgttcctggatatgtagatcctgtggaatttggtgtgttgaca
gaatttgcatatccattggaagaaaaccttggtgagattgttgttgctaccactagagtg
gaaacaatgttgggtgatacagcaattgctgtacacccagatgattcaagatacaagaaa
ttgcatggtaaagtggcaatccatccttttaatggcagaaggattcctattatttgtgat
gaaatacttgttgatccaaatttcgggactggtgctgtcaagattacgcctgctcatgat
cccaatgattttgaagttggaaagcgtcacaagctggagttcatcaatatcttcacagat
gatggaaatataaacagcaatggggggccagattttgcagggatgccgagattcaaagct
cgtgtagcagtaacgaaagccttggaagaaaagggattatatagaggtgctaaggacaat
gagatgcgtcttggagtttgttcaagaactaatgatgttgtggagccattaataaagcct
caatggtatgtcaattgcagcaccatggccaaggatgctcttgatgctgttatgagtgat
gactataagaagattgagattataccaaaagagtatacagctgattggaaaagatggctt
gaaaatattcgagactggtgcatctcaaggcagctatggtggggccaccgtatacctgct
tggtatgtcaccttggagaatgaccaactgaaagaactgggagcttataatgatcattgg
gtagtatgtcgaaatgaggaagaggcacaagctgaggctgctagaagatttactgggcag
aagtttaagattgctcaagatcctgatgtcctagatacctggttttcctctggtctcttt
ccattgtcggttttgggatggccagatgagacagacgattttaagaacttctatccaact
tcagttcttgaaactgggcatgacattctttttttctgggttgcccgaatggtgatgcta
gggatgaaactgggaggtgacgtgccttttaaaaaggtctatcttcatcctatgatccgt
gatgcacatggtcgtaaaatgtcaaaatcattggggaatgttgtggaccctcttgaggtt
ataaatgggatatcactcgaagatcttcacaagaggctggaggaagggaacttggatccc
agtgagctttccagagctaaagatatacaaagaagagatttccctaatggcattccagaa
tgtggggcagatgctcttcgatttgctcttgtttcatatactgctcaggctgataaaatt
aacttggatattcaacgggttgttgggtaccggcaatggtgcaacaaactgtggaacgct
attaagtttgcgatgagcagattgggtgatgcttacactcctccaaccactataaatcct
caagtcatgccaaccagttgccaatggatactctcggtcttgaacaaggctgttggcaaa
actgtctcctcacttgaggcttatgagtttgctgatgctgctagtgctgtgtactcatgg
tggcaattccagctctgtgatgtattcatagaggtaatcaaaccctacttcgtcagtagt
gatgagtcatttgcatctgcaagaggttttgctcgggatacactttgggtatgccttgat
agtgggcttcgactactacatccatttatgccatttgtcaccgaagagttgtggcagaga
cttcctcaacctagagatactataaggaaagaatctatcgtcattagcgagtatccttct
gttgtacagtcgtggaccaatgaaaatgtggagcagcacatggagctagttgagtctgca
gtaaaatctctaaggtctcttaagtctttactgcctgcaaaagaaaggaatgaaaggaga
ccagcttttgcactttgccggaatgtggaagttgtagacattattcgaagttatgagtta
gaaattttaactcttgctggtttgtcctctttgaagattctgaatgaggatgatgctgtt
cctgctggatgttcagtagatgttgtaaatgcaaatctctcggtttatctcaagcttaaa
ggaacaattaatgctgaagtagagcgtgaaaagctgaggaagaaaatggaggaaacaaag
aggcaaaaagaaactctggaaaagatgatggatgcatctggatacaaagaaaaagtccct
cctcaaattcacgaagaaaatatggcaaaactcagcaaactaatgaatgaggtcttgtca
cttgaagaagccagccaacaccttgaacatgatattgctgcccaagcagtcgttgaaaac
gataaataa
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