Amaranthus tricolor (tampala): 130809170
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Entry
130809170 CDS
T09367
Name
(RefSeq) chaperonin 60 subunit alpha 2, chloroplastic-like isoform X1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130809170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atri03019
]
130809170
03110 Chaperones and folding catalysts [BR:
atri03110
]
130809170
03029 Mitochondrial biogenesis [BR:
atri03029
]
130809170
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
atri04147
]
130809170
Enzymes [BR:
atri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
130809170
Messenger RNA biogenesis [BR:
atri03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
130809170
Chaperones and folding catalysts [BR:
atri03110
]
Heat shock proteins
HSP60 / Chaperonin
130809170
Mitochondrial biogenesis [BR:
atri03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
130809170
Exosome [BR:
atri04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
130809170
Exosomal proteins of other body fluids (saliva and urine)
130809170
Exosomal proteins of breast cancer cells
130809170
Exosomal proteins of colorectal cancer cells
130809170
Exosomal proteins of bladder cancer cells
130809170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
130809170
NCBI-ProteinID:
XP_057530813
LinkDB
All DBs
Position
3:complement(30952874..30962890)
Genome browser
AA seq
600 aa
AA seq
DB search
MALGVSNGTIFALQPRFLEAKTHTPCFSCYNLSKYKLYGQLSSSRLPKNLCIGNTLFVRA
GPKKIHFDTKCRETLQAGINKLADAVSVTLGPKGRNVIVADSKSLKVINDGVTIARAIEL
SDAIENAGAMLIQEVASKVNDAAGDGTTTAIILAREMIKSGLLAISFGANPNGLRRGMEK
TVTELIRILRKRSILVQGRNDIRAVASISAGNDDFVGSILAEAIDKIGADGVISIESSST
SETSVIVEEGMKIDKGYMSPYFITNQNKSTVEFDNAKVLVTDQKISTVQEIVPLLEKTAQ
LSVPLLIIAEDISKQVLETLIVNKSKGLVRAAVVKCPGFGDAKKSLLQDIALMTGGDFLS
GDLGLNIGDATSDQLGIARKVTITNSTTTIISDDSTKAEIRARILQIKKDLAETDSSHLS
RKLAERIAKLSGGVAVIKVGAHTETELEDRKLRIEDAKCATFAAMDEGIVPGGGATYIHL
SKEIASITSTWGDNDEIIGADIIRKALLAPAKLIAENAGVDGEVVVDRIRSSEWRIGYNA
MAGRFEDLIDSGIIDPCRVTRCGLQYSVSIAGLVLTTQAIMVDKVREPKPSVPHVPGISP
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggcgttgggagtttccaatgggactatctttgcattgcaaccacgatttttggaagca
aaaacacatacaccttgtttttcttgctacaatctttctaaatataaactatatggacag
ttgtcatcttctagattgcctaaaaatctatgtatcggaaatacattgtttgtaagagct
ggcccaaagaaaatccattttgatacaaagtgtagagaaacactacaagctggtataaac
aagcttgctgatgctgtttctgtgacattaggacccaaagggcgcaatgtgattgttgca
gattctaaaagtttgaaagtaattaatgatggtgttaccattgcaagggccatagaactt
tctgatgcaattgaaaatgcaggggcaatgcttattcaagaggttgcgtctaaggtgaat
gatgcagctggtgatggtactacaactgcaattatattagctcgagaaatgatcaaatct
gggctcttagctatttcatttggtgctaaccctaatggtttgagacgaggaatggaaaaa
actgtaacagaactaataagaatattaaggaagcgcagcatcctcgttcaggggcgaaat
gatataagagctgtggcttccatttctgctggaaatgatgactttgttgggagtatcctt
gccgaagccattgataaaattggggcagatggtgtgatctctatagagtcttcctcaaca
tctgaaacttccgtaattgttgaagaaggaatgaagattgacaagggatatatgtcgcct
tattttattacaaatcagaataaatcaacagtagagttcgataatgccaaagttctagtg
actgatcagaaaatatcgacagtgcaagaaatcgttcccttgctagaaaagactgctcaa
ttaagtgtaccgttgttgatcattgctgaggatatctcaaagcaagtcttggaaacattg
attgtcaacaaaagcaaaggacttgttagagctgctgttgtcaaatgtcctggatttggg
gatgctaaaaaatcgttgctgcaagatattgctctgatgacaggtggtgactttttgtcg
ggggatctgggtttgaacattggagatgcgacttcagaccaacttggtatagcccgcaaa
gtgaccataacgaacagcaccactaccatcatttctgatgattctacaaaagctgaaatc
cgagcaagaattttgcagataaagaaggatttagctgagactgacagctctcatctctcc
aggaagcttgcagaaagaattgcaaagctgtctggtggtgtggctgtgatcaaggttgga
gctcacaccgagacagaacttgaggatcgtaaacttagaattgaagatgcgaaatgtgcc
acttttgctgccatggatgaaggaatagttcctggtggtggtgctacttatatccattta
tccaaagagattgcctcgattacttctacctggggagataatgatgaaataattggagct
gacataataagaaaggcgcttttggcaccggccaaattgatagctgagaatgcaggggtt
gacggagaagtagtggtagatagaatacgtagttcagaatggcggatcggatacaatgca
atggctggccgattcgaagatctcatagattcaggtattattgacccttgccgtgtcaca
agatgtggtttacagtactcagtttctattgcagggcttgttcttaccactcaagctata
atggttgacaaagttcgggagcccaaacctagtgttccgcatgttccaggaatatcccct
taa
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