Amaranthus tricolor (tampala): 130809226
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Entry
130809226 CDS
T09367
Name
(RefSeq) small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial isoform X1
KO
K06949
ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.-
3.1.3.100
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri00730
Thiamine metabolism
atri01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
130809226
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
atri03009
]
130809226
Enzymes [BR:
atri01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.100 thiamine phosphate phosphatase
130809226
Ribosome biogenesis [BR:
atri03009
]
Prokaryotic type
GTPases
130809226
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RsgA_GTPase
MMR_HSR1
AAA_23
AAA_16
nSTAND1
AAA_21
AAA_29
AAA_28
ABC_tran
AAA_22
AAA_5
IIGP
SMC_N
Guanylate_kin
AAA_30
AAA
Motif
Other DBs
NCBI-GeneID:
130809226
NCBI-ProteinID:
XP_057530895
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Position
3:31447397..31453197
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AA seq
488 aa
AA seq
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MAAISFSLLRHHATLRFIPSPTTYLLLHRNFSHLTATIFSRKFQDKEKHDQSQALRAARE
REYTRDKHTHSSSTLLKPGFLSPNQAIGMVASAQANFMRVNVIVPPEHSIALKNEGLKIP
EGSESGIGVELLCVVRAVLKKIKRRVLVGDKVLVGSIDWVDRRGMIEDVYPRKSEILEPP
IANADHFMVVFSMDQPKVEPFLLTRFLVEAESTGFPVTLALNKCELVSDEVLVEWKTRLR
HWGYAPIFCSVESKHGLDSLAFYLRDRTSVIVGPSGVGKSSVINALRSAGQSPSVAEEIS
GSKWLEEQRVGEVSTRSGRGKHTTRNVSLLPLAGGGLLADTPGFNQPSLLKVTKHNLAQA
FPEIQKMLQENPNGCAFNNCLHIGEPGCVVTGDWERYPYYFQLLDEIKIREEFQLRMMGT
KKEDDVRKKVGDMGVTVAEPKLELKRHRRQSRKKLNQSLLDELDELDEDDEDDLEDNPII
RAMEQENK
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaatatcattctctctgcttcgccaccacgcaacgctgcgtttcattccttct
ccgaccacttatcttcttctccaccgcaatttctctcacctcaccgccacaattttctct
agaaagtttcaagacaaagaaaaacacgaccaatcgcaagcactcagagccgcacgcgag
cgggagtacacacgtgataagcacacccactcatcctctacgctcttgaaacctggattt
ctctcgcctaatcaagcaattggcatggtagcttcagcacaggcgaatttcatgcgcgta
aatgttattgtacctccagaacattctattgctttaaaaaatgaaggtttgaagattcca
gaaggttctgaaagcggtattggagttgaattactctgtgtagtgagagcagtgttgaag
aagattaagcgaagggttttagtaggagataaggttttagttgggtcaattgattgggtg
gatcgcaggggtatgatagaggatgtgtatccgcgaaaatctgagattcttgaacctccg
attgctaatgctgatcattttatggttgtgttttctatggatcagcctaaggtcgagccg
tttttgttgactaggtttttggttgaggcggagtctactggatttcctgtcactcttgcg
ctgaataaatgtgagctcgttagtgatgaggtccttgtagagtggaaaacaaggcttcgt
cattggggatacgcacccatattttgtagcgtcgagtcaaaacatggacttgattccctc
gcattttacttgagagataggacatctgtgattgtgggtcctagtggtgttggcaaatcc
agtgtgatcaatgccttgaggagtgctggtcagtccccctcagttgcagaagagatatct
ggcagcaaatggttagaggagcagcgagttggagaagtgtctactagaagtggaagaggg
aagcacaccactcgaaacgtgtctttgctgcccttggctggaggaggacttctagctgat
accccaggttttaaccagcctagcctactgaaagtgacaaaacacaacttagcacaggca
ttccccgagattcagaaaatgctccaagaaaatccgaacggttgcgcatttaacaattgc
ttgcacattggcgaacctgggtgtgttgtgacaggggactgggagagatatccttattac
ttccaactgctggacgaaattaagatcagggaagaattccagctaaggatgatgggcact
aagaaggaggatgacgtcaggaagaaggtgggggatatgggtgtcacagtagctgagccc
aaactcgagctaaagaggcacaggagacaatctcgcaagaaattgaatcaatctctatta
gatgagttggatgagttggacgaagatgatgaggacgacttggaggataacccaatcatt
cgcgctatggaacaagaaaataagtga
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