KEGG   Amaranthus tricolor (tampala): 130809509
Entry
130809509         CDS       T09367                                 
Name
(RefSeq) UBP1-associated protein 2C
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
atri  Amaranthus tricolor (tampala)
Pathway
atri03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:atri00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    130809509
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:atri03019]
    130809509
   03041 Spliceosome [BR:atri03041]
    130809509
Messenger RNA biogenesis [BR:atri03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     130809509
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     130809509
Spliceosome [BR:atri03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    130809509
SSDB
Motif
Pfam: RRM_1 RRM_7
Other DBs
NCBI-GeneID: 130809509
NCBI-ProteinID: XP_057531292
LinkDB
Position
3:complement(10055417..10061141)
AA seq 424 aa
MDPTKKRKLDENGLSDTDPIPKLTPEDALKIIESISTDQLRDIVKNTVLSNPDVLEAVRS
IADRDVTQRKLFIRGLGWETTSESLRAVFASFGQLEEAVVILDKNTSKSKGYGFVTYKHI
DGAILALKEPSKKIDGRVAVAQLASAGLSGGPTNNVGGPNADTSLRKIYVGNVPQDMPAE
RLLSHFSSYGEIEEGPLGFDKQTGKSKGFALFVYKTPEAAQASLIEPTKNIDGRQLVCKL
ASEGKKGKGFVGQGQGQGPVGDSMGMQPGGPAPGPYGGPGGPGGYSSYGGGYPGGPGGMG
PNPMNSGYASSVGSQGPGGYGGSGSYSGGMNGGGGYGGSQYGGPNSTGYGGYGGAGSGVG
GPGGGAGRGGSMYGMPPSSGGGYPDSGHYGGYPSQQHQPTGTSPAPRVPPSGGVSGYPNA
PPYY
NT seq 1275 nt   +upstreamnt  +downstreamnt
atggatcctaccaagaagcgtaaactcgacgaaaatggactttctgatacagatccgatt
cctaaacttacacccgaggatgctctcaaaatcatcgagtctatctctaccgaccaactc
cgcgatatcgtaaaaaacaccgttctttcaaatcccgacgttcttgaagctgttcgttcg
attgccgaccgtgatgttactcaaagaaagctattcattcgtggtcttggttgggaaacg
acgtcagagagtcttcgtgctgtttttgcttcattcggacaactcgaagaagctgttgtt
atacttgataagaatacttctaagagtaaaggatatgggtttgttacatataagcatata
gatggtgccattttagctcttaaagagcccagtaagaagattgatggccgagttgctgta
gctcaattggcgtctgctgggctttctggtggacctactaataacgttggtggtcctaat
gctgacacttcgttaaggaagatttatgttggtaatgttcctcaagatatgcctgccgaa
agactgttatctcacttctctagttatggagagattgaggaagggcctttgggttttgat
aagcaaactggaaaatcaaaggggtttgctttgtttgtgtataagacacctgaggctgct
caagcttcgttgattgagcccacgaagaatattgatgggaggcagttggtttgtaagttg
gctagtgaagggaagaaagggaagggatttgtggggcagggtcaggggcaaggtccagtt
ggtgatagtatggggatgcagcctggtggaccggcccctggaccttatggtggtcctggt
ggacccggtgggtattcgtcatatggtggtggctatccaggtgggcctggtggaatggga
cctaatccaatgaactcagggtatgcatcttctgtgggaagtcagggacctggtgggtat
ggtggtagtggaagttatagtggtgggatgaacggaggaggagggtatggtgggtctcaa
tatggtggaccgaattcgactgggtatgggggatatggtggtgcgggaagtggtgtagga
ggacctggagggggtgcaggacgtgggggttcaatgtatgggatgccacccagttcaggt
ggaggatatccagatagtggacattatggtggctacccaagtcagcaacaccaacccacc
gggacgtctccggctcctagagtaccaccttcaggtggtgtttctgggtaccctaatgct
ccaccttattactaa

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