Amaranthus tricolor (tampala): 130809606
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Entry
130809606 CDS
T09367
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
130809606
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
atri04040
]
130809606
Ion channels [BR:
atri04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
130809606
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
130809606
NCBI-ProteinID:
XP_057531322
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Position
4:1816251..1824243
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AA seq
728 aa
AA seq
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MSGGLQLSQFMNYMNDNRDRGVRFEGRNSEGSTSSDQPLYPTQRPLPHPENVAQFGSAFD
VIRRGFQRGSPGMRTFGESLNFKVLKNQSTKKLGKQEIILDPQGPLVQKWNKMFLISCFL
AMACDPLFLYIPVIDGAKKCLKLDVNLEIIACFLRTFTDLFYILHIILQFRTGFVAPPSR
VLGRGELITDHAAIAKRYISSYFFVDILAVLPLPQMSVLIIFPKLMGGGRLTSKGLLKLV
IFIQYIPRFIRIFPLYKGVARTSGIITETAWAGAALNLFLYMLASHVFGAVWYLFSIDRQ
GKCWHISCIGEGCNHLSLYCNDKHRASAFNSSYCKLVDPDEITDFSVFNFGLFYDALQSE
VVQSTHFWKKLFYCFWWGLRNLSSLGQNLKTSTFIWENLFAVFICVAGLVLFSLLIGNMQ
TYLQSTTIRVEGMRIRRRDAEQWMSHRLLPEDMRERIRRYEQYDWQEKRGVDEESIIRNL
PRDLRRDIKRHLCLDLLMSVPIFAKMDEQLKDALCDRLKPMLYTENSKIVREGDPVNEML
FIMRGSLLTMTTNGGRTGFFNSVTLKAGDFCGEELLTWALDPHSYSNLPISTRTVKSETE
VEAFALFPDDLKFVALQFRRLHSKQLRHTFRFHSQQWRTWAACFIQAAWRRHCRRKLEKS
IREAEEYALPKEGGRSPSFGATIYVSRFAANALRNLRQNSPRNARILPRSPLLSLQKPTE
PDFLSEGD
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggaggtttgcagctatctcaatttatgaattatatgaacgacaatcgagacaga
ggtgtaaggtttgagggtcgcaattcagaagggtcaactagttccgatcaaccactttat
cctactcaaagaccattgccacatcctgagaatgtagcacaattcggctcagcttttgat
gttatccgtcgaggatttcagagaggttctccaggaatgagaacctttggagaatctctg
aactttaaggtgctcaagaatcaatctactaagaagctgggaaagcaggagattattctt
gatccccaggggccattggtacagaaatggaataagatgtttctaatctcatgttttctt
gcaatggcctgcgacccattattcctttacatccctgtgatagatggtgctaagaaatgc
ctcaagctggacgtgaacttggaaatcatagcttgttttcttcgcacgtttacagacttg
ttctatatacttcatattatcttgcagttccgtactggctttgttgctcctccatctcga
gtgcttggaagaggtgaattaatcacagaccatgctgctatagctaaaagatatatctct
tcttacttctttgtggacatacttgctgtcttacccttacctcagatgtcagttttgatt
atctttccaaagttgatgggtggaggtcgtttgacttcaaagggtttgttgaaattagtg
attttcatccaatatatcccacggttcattcggatttttcctttatacaagggagtagca
aggacatcaggcataattactgaaacagcttgggctggagctgctctcaatctgttcttg
tacatgctagcaagccatgtgtttggagcagtttggtatcttttttctatagatcggcaa
ggaaaatgctggcatatttcatgtattggggaaggatgtaaccatctgtcgttgtattgc
aacgacaaacacagagcttcagcattcaacagttcttactgcaagctagtagaccctgat
gaaataactgatttcagtgtttttaactttggcttgttttatgatgctcttcaatcagaa
gttgtgcaatccactcatttttggaaaaaactattttactgtttctggtggggccttcga
aatctcagctctcttggacaaaatctgaaaacaagtactttcatttgggagaacttattt
gcagttttcatttgtgtagctggactggtcctgttttccttgcttattggaaacatgcag
acatacctacaatcaacaaccataagagtagaggggatgagaatcagacgacgagatgca
gagcaatggatgtctcatcgtctgcttccagaggacatgagagagaggattcgaaggtat
gaacaatacgattggcaagaaaaaagaggtgttgatgaagagagtataattcgtaacctt
cctagggatctcaggagggacatcaagcggcatctctgtttggatcttctaatgagtgtt
cccatatttgcgaaaatggacgagcaactgaaagatgcgttgtgtgatcgtcttaaaccg
atgctttatactgagaacagcaaaattgttcgcgagggtgatcctgttaacgagatgctg
tttatcatgagaggaagcttattaactatgaccacaaatggtggaagaactggtttcttt
aattcagttaccctcaaggctggtgatttttgtggtgaagagttgctcacatgggcccta
gatccacactcttattccaatctgcccatctcaactaggaccgtaaaaagcgagacagaa
gttgaagcctttgcgctgtttcctgatgatctaaaatttgtggcattacaatttcgtagg
cttcacagcaagcagctccgacacacgtttaggtttcattcacagcagtggagaacatgg
gcagcctgttttatacaggcagcatggaggcggcactgcagaaggaagcttgagaaatct
atacgagaggctgaagaatacgctctaccaaaggagggtggacgctcaccaagctttggt
gccaccatttacgtctcaaggtttgctgccaatgcacttcgtaacctgcgacaaaatagt
ccccgaaatgcaagaattcttccaaggtcaccccttctcagcctgcaaaagccaactgag
cctgattttctttctgaaggtgattag
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