Amaranthus tricolor (tampala): 130809607
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Entry
130809607 CDS
T09367
Name
(RefSeq) long chain acyl-CoA synthetase 4-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri00061
Fatty acid biosynthesis
atri00071
Fatty acid degradation
atri01100
Metabolic pathways
atri01212
Fatty acid metabolism
atri04146
Peroxisome
Module
atri_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
130809607
00071 Fatty acid degradation
130809607
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
130809607
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
atri01004
]
130809607
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
atri04147
]
130809607
Enzymes [BR:
atri01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
130809607
Lipid biosynthesis proteins [BR:
atri01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
130809607
Exosome [BR:
atri04147
]
Exosomal proteins
Exosomal proteins of breast milk
130809607
Exosomal proteins of breast cancer cells
130809607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Trypsin_2
Motif
Other DBs
NCBI-GeneID:
130809607
NCBI-ProteinID:
XP_057531323
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Position
4:complement(1834866..1843599)
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AA seq
661 aa
AA seq
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MEEKKYVVEIEKAKEAKEGKPSVGPVYRSVAAKHGFPPLLPGMETCWDIFRISVKKYPNN
QMLGYNGNAGNYVWLTYKEVYDIVIKVGASIRSCGISKGGRCGIYSTNCPKWMISMQACN
AHGLYSVPLYDSLGAGAVEYIICHAEVSIAFVEENKISEVLKTLSSTSKYLKTLVSFGKF
KNNQKEHAERFGLAIYSWDEFLQLGNNQQFDLPTKKKSEICTIMYTSGTTSEPKGVLISN
ETVVTVVSGINFSLQSINEELRQDDVYLSYLPLAHIFDRVVEELFICTGASIGYWRGDVK
LLSEDIRDLKPTLLCSVPRVLDRIYSGLMEKISSSGSLKRTLFNIAYSYKLTNMNKGFKQ
EEASPLFDKIVFSKVKEGLGGRLRLILSGGAPLASGVETFLRVVTCAHVLQGYGLTESCA
ASFIAQPNDMSMIGTVGPPMPNVDICLESVPEMGYDALSSTPRGEICIRGKTLFTGYYKR
EDLTNEVMVDGWFHTGDIGEWQPDGCMKVIDRKKNIFKLSQGEYVSVENLENTYSLASEI
DAIWVYGNSFQSFLVAIVNPNKQALERWAADEHGVVDDFSSLCQNPQAKAYILTRLKEIA
KENKLKGFEEIKAVHLDHIPFDMDRDLLTPTFKKKRPQLLKYYKDTIDNLYQERNEQRQS
Y
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaaaaaatatgttgtggagatagagaaagccaaagaagcaaaagaagggaaa
ccttcagtgggtccagtttacagaagtgtagctgctaaacatggttttccaccacttctt
cctggaatggaaacttgctgggatatttttcgcatatcagtgaagaaatacccaaataat
caaatgcttggatataatggaaatgcaggaaattatgtttggttgacatacaaggaggta
tatgacattgttattaaggttggagcatctattcgtagctgtggtattagtaaaggagga
cgatgtggtatctatagtactaattgcccgaaatggatgattagcatgcaggcctgtaac
gctcatggattgtacagtgtccctctttacgattctcttggtgctggtgcagtggaatat
ataatatgtcatgcagaagtgtctattgcttttgtagaagaaaacaagatttctgaggtt
ctcaaaacattgtccagtacatcaaagtacttgaaaacacttgtgagcttcggaaagttt
aaaaataatcaaaaggaacatgctgaaagatttggcctggctatctactcttgggatgag
tttctgcaactgggaaacaatcaacaatttgatcttcctacaaaaaagaagagtgaaatt
tgcacaataatgtatactagtggtacaactagtgagcccaagggagtattgatttccaat
gagactgttgtcactgttgtatctggcattaatttctcattgcagagcataaatgaagag
ttaaggcaggatgatgtatacctctcatatcttcctctagcacacatcttcgatcgagtg
gtcgaggaattattcatctgtaccggtgcatcaataggatattggcgaggagatgtgaaa
ctgctgtctgaagacatcagagacctgaaaccgacacttctttgttctgttccacgcgtt
ttagacaggatttattcaggtttgatggaaaagatatcttcttctgggtctctgaagcgt
acattattcaatatcgcctactcctacaaactaactaatatgaacaaaggatttaagcag
gaagaggcatcccctctttttgataagattgtgtttagtaaggtcaaagaaggtcttgga
ggaagacttcgtttgatcctttccggaggagcacctcttgcttccggtgtcgaaacattc
ctgcgtgtagtgacttgtgcgcatgtgctgcaaggatatggtcttacagaaagttgtgca
gcttcattcattgcacaacctaatgatatgtcaatgatcggaaccgtgggccctcctatg
ccaaacgttgatatctgcttagaatccgtgccagaaatggggtatgatgctctttccagc
actccacgtggagaaatatgcattcgaggaaaaaccctcttcactggttactataaacga
gaagacctcacaaacgaagtcatggttgacggatggttccacacaggggatataggagag
tggcaaccagatggatgcatgaaggtcattgatcgtaagaaaaacatcttcaagctctca
cagggtgaatatgtgtcagttgaaaatttagagaatacttacagtcttgcttcagaaatt
gatgcgatttgggtttatggaaatagcttccaatcgttcctcgttgctattgtcaaccct
aacaaacaggctcttgaacgctgggcagctgacgaacatggagttgtagatgatttcagt
tcattgtgtcaaaaccctcaagcaaaggcctacatccttactagacttaaggagattgcc
aaagagaacaagttaaaaggttttgaagaaatcaaggccgtgcatcttgatcatatacca
tttgacatggatcgtgatctcctaactccaacttttaagaaaaagaggcctcaattactt
aagtattacaaggatacgattgacaacttataccaagaacgaaatgaacaacgacaatca
tattag
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