Amaranthus tricolor (tampala): 130809615
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Entry
130809615 CDS
T09367
Name
(RefSeq) protein REDUCED CHLOROPLAST COVERAGE 1
KO
K03255
protein TIF31
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
atri03012
]
130809615
Translation factors [BR:
atri03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
130809615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_10
TPR_12
eIF3_p135
TPR_NPHP3
CLU_N
TPR_2
TPR_MalT
TPR_9
TPR_8
CLU
Motif
Other DBs
NCBI-GeneID:
130809615
NCBI-ProteinID:
XP_057531333
LinkDB
All DBs
Position
4:1934840..1950460
Genome browser
AA seq
1879 aa
AA seq
DB search
MAPKNGRGKGKGDKKKKEEKILPVVMDITVNLPDETSVILKGISTDRIIDVRKLLSVHTM
TCHITNFSLSHEVRGPRLKDTVDVAALKPCILTLAEEAYDKESAAAHVRRLLDIVACTTS
FGPSASSKEGGKNEDAKSARSAQDKSSSSAAATKKAGNKLNGGKQAPATEESAGKPASKD
DISMMIDGEGETNNSCPKLGSFYEFFSLPNPSPLQFIRRASKEADDQILKDDHLFFIDVK
LCNGKLVLVEACKRGFISIGKHRILGHNLVDLIRQLSRAFDNAYDELMKAFSERNKFGNL
PYGFRANTWLIPPSAAQSISTFPSLPVEDETWGGNGGGWGRDGKSDLIPWSNEFRFVASM
PCKTPEERQIRDRKAFLIHSLFVDVAIFRAISTLRHVMQKTSDSQTVVNDDDVIHSEQVG
DLHITIMKDVSLASCKLDTKIDGLRATGLDQKALTEKNLLKGITADENTAAHDISSLGSV
NLRYAGYIVTVRVKVKEDAPVDSLSPSIEYFDQPEGGANTLNINSLRLLLHKGAVTDNHK
WVAQSEQSENQKLSTNQAFLGKLFEDSLAKIQEEQKKQDNFVRWELGACWIQHLQDQKNS
EKDKKLSAQKGKNEMKVEGLGTPLKSLRNKKSEGTALVNSDKLSTNSSNAESASSFTEAQ
CITSSSEGELALNKILSDAAFTRLKESDTGLHQKSLQELIDLSQKYYDEVALPKLVADFG
SLELSPVDGRTLTDFMHTRGLRMRSLGRVVKLSEKLSHVQSLCIHEMIVRAYKHILRAVI
ASVGTDDAAATVASALNLMLGIPENDNSDKLFNVDSLVWRWLEVFLMKRYDWDINGFNFK
DLRKFAILRGLCQKVGLELVPRDYDMNSPNPFRKTDIVSLIPVHKQAACSSADGRQLLES
SKTALDKGKLEDAVNYGTKALAKLVAVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIYQQ
KALDINERELGLDHPDTMKSYGDLAVFYYRLQHTELALKYVKRAMYLLHLTCGPSHPNTA
ATYINVAMMEEGLGNVHVALRYLHKALKCNQRLLGPDHIQTAASYHAIAIALSLMEAYPL
SVQHEQTTLQILQAKLGPDDLRTQDANAWLEYFESKAFEQQEAARNGTRKPDASIASKGH
LSVSDLLDYINPSPDTKGRSAMSVKRKSYFVKVQEKANQVFSKSSTDGSPKGPNLIVSDG
DIEPEGIIGESESDIKSDASKLVGRNVEPVKPVVPVPVPETEKVKQPVIPSKVSSEALIE
AEDGWQPVQRPRSAGGHGRRVRQRRATIGKVYGYQKKEVIETDTAKQNNSHQNTNYYVLK
KRSLSPASFSDQHIAKNGHQVSKFGRRIVKAVTYRVKSVPSSAKVEPSEVSSRETESGKN
PEKPTIVRLGKSPSYKDVALAPPGTISQLQANVPQNDSSNDAEVAVEKSEDAVCNHLREN
VTSEKEDVKVVNVKEINECSLSDSKESSSPGHEVKVEKLSDDVATNVDTSGMVPSIVDKA
ESDTIDIHEVVPENEPINNSTTNSISSSKEVKFEMDISCSTQIEHASPLQGEEHLEDKPM
ITNLSDARDFPSKKLSASAVPFNPSPIIPRSAPMPLNMNLPSGPGAVPAVGPWPMNMALH
PGPATVMPAVNPLCSSPHHAYPSPPPTPNIIPPVPFMYPPYSQAQPVPLNSFPPNGNHFR
RSHYVWQCNMNPPTPEFIPTTIWPGCRPVEFSVIPPVTEPICEPNLEQRVQSPISEGSQG
LVPLLPDDISSGEETKKVVLPLPEVVHDSAWIGLENEKPNEGRTCEDNIGTTPVYSDALK
EKSGDNVEVTRLSHHVEDDERTFSILIRGKRNRKQTLRVPISLLRRPHCSQSFKVAYSRV
LRDSEISRPLTSCETNLAT
NT seq
5640 nt
NT seq
+upstream
nt +downstream
nt
atggcacccaagaatggaagaggaaaaggaaagggagacaagaagaagaaagaagaaaaa
attcttccagttgttatggatatcacagtgaatcttcctgatgaaactagtgtaattttg
aagggaatatccacagatagaatcatcgatgttcgcaaacttctctccgtgcatacaatg
acatgccatattaccaatttttccttatctcacgaggtcaggggcccacgtctaaaagac
acggtggatgttgcagctctaaaaccttgcattcttacgttagctgaagaggcgtacgat
aaggaaagtgcagccgcgcatgttagaagattgttggacattgtagcatgcacaacgagc
tttgggccatctgcgagcagtaaagagggaggcaaaaatgaagatgctaaaagtgcgcgt
agtgcgcaggataagagttcgtcgtcggcggcggcaacgaagaaggctggaaataagttg
aatggcggaaaacaagcgccagcgacggaagaatccgccggaaaaccggcgtcgaaagat
gatatttcaatgatgattgacggagaaggagaaacgaacaattcatgccctaaacttggg
agtttttacgagtttttctctctccctaatccctctcctcttcaatttattcggagagct
tcaaaggaggctgatgatcagattttaaaggatgatcatctatttttcattgatgttaag
ctgtgcaatggaaagctggttcttgttgaggcatgcaagcgaggttttatcagtattggg
aagcaccgaattctcggtcacaatcttgttgatttgataagacaacttagtagagctttc
gataatgcttatgatgagcttatgaaagccttctcagagcgtaacaagtttggtaatctt
ccatatggcttcagagccaatacatggctaattcctccatctgcagcacagtcaatttcg
acatttccctctcttcctgtagaggacgaaacttggggtggcaatggcgggggctgggga
agagatggaaaaagtgatctgataccatggtcaaatgaattccgttttgttgcgtcaatg
ccgtgcaaaactccagaggagagacaaatacgggatagaaaagcttttcttattcatagc
ttatttgtagatgtagcaatatttagggcaatttctaccttgcgacatgttatgcaaaaa
acgagtgattctcaaacagttgtaaatgatgatgatgtaattcattctgagcaagttggt
gatttacatatcactatcatgaaggatgtttctcttgcaagctgtaagttggacactaaa
attgacgggcttcgggccactggtttggatcagaaggctctaacagagaagaacttgctt
aaagggataacagcagatgagaatactgctgcccatgatattagcagtttaggctctgta
aatctcaggtacgctggttacattgtcacagtgagggttaaggtcaaagaggatgcacct
gtggattcattgtcacctagcatagaatattttgatcagcctgaaggtggtgccaatact
ctcaatattaacagtttaagactgttgctacataaaggagcagtcacagacaatcacaaa
tgggtagctcaatctgagcagtcagagaatcaaaaacttagcaccaatcaagcttttctg
gggaaattatttgaagatagtcttgctaagattcaggaagagcaaaagaagcaagataat
ttcgttagatgggagctaggagcatgttggattcaacatcttcaagaccaaaaaaattca
gaaaaggacaagaaactctctgctcaaaaaggtaagaatgagatgaaggttgaagggctg
ggaacacccctcaaatcactccgcaacaagaaatcagaaggaactgctctggtgaattct
gataaattgtccacaaattcaagcaatgctgaatccgcttcatcatttactgaagcacag
tgtataaccagttcaagtgagggtgagcttgcactaaacaagatcttgtcggatgcagct
ttcactcgtttaaaagaatcagatacaggattacaccaaaagtcattgcaagaacttatt
gatttgtctcagaaatactatgatgaagttgctcttcctaagctggttgcagattttggc
tcgttagaactttcaccagttgatggaagaacactgactgattttatgcatacacgaggt
cttaggatgcgttctcttggacgtgttgtaaagctgtcagagaagctgtctcacgttcag
tctctttgtatccatgagatgattgttcgagcttataagcacattcttcgggcagtgatt
gcttctgttggtactgatgatgcggctgcgacggtggcttcagcattaaatttaatgctg
gggatacccgaaaatgataattcagataaactgtttaatgttgattctctggtatggaga
tggttggaggtattcctgatgaagcggtatgattgggatatcaatggttttaacttcaag
gacttgagaaaatttgccattctccggggactttgtcaaaaggtgggtctcgaattagtt
ccaagggattatgatatgaattctcccaatcctttccgtaaaacagatattgtcagcttg
atacctgtccacaagcaagcagcttgctcatctgctgatggtaggcagcttttggagtca
tcaaagacagctctagataaaggaaagcttgaagatgctgttaactatgggacaaaggct
ctagcaaagctagtagcagtttgtggtccttatcatcggatgactgccggagcttatagt
cttcttgctgtggtcttgtaccataccggagactttaaccaggcgacaatctaccaacaa
aaagccttggacattaatgaaagggaactgggactcgatcatcctgacacaatgaaaagc
tatggagatctagctgttttctattaccggcttcagcatactgagctggctctaaagtat
gtaaagcgagcaatgtatctgttacatcttacatgtggtccatctcatccaaatactgct
gccacttacatcaatgtggctatgatggaggaaggcctcgggaacgtgcatgttgccctt
cgataccttcataaggctctaaaatgtaaccagaggttattaggaccggaccacattcag
acagcagctagttatcatgccattgctattgcactttctttgatggaagcatatccttta
agcgttcaacatgaacaaacaacattgcaaattcttcaggctaagctcggacctgatgat
ttacgcacacaggatgctaatgcttggctcgagtattttgaatccaaggcttttgagcag
caagaagctgctagaaatgggactcggaaacctgatgcatccatagcaagtaaaggccat
ctaagtgtttcagacctgcttgactacataaatccgagtcctgatacaaaagggagaagt
gctatgtcagtcaagagaaaaagctactttgtgaaggtccaagagaaagcaaatcaggtt
ttcagcaaatccagcactgatggttctccaaaagggccaaatctcatagtttcagatggt
gatattgaacctgaaggcataattggtgaatctgagtctgatattaaatctgatgcatca
aaactggttggtagaaatgtagaacctgttaagcctgttgtccctgtccctgttcctgaa
actgaaaaagtcaagcagcctgtcatccccagcaaagtttcatctgaagcccttattgaa
gctgaagatggttggcagcctgtccaaaggccaagatctgctggtggacatggtcgtcga
gtaagacagcggcgtgctacaattggcaaagtatacggctatcagaagaaagaagtaatt
gaaactgacacggccaaacaaaataattctcaccaaaataccaactactatgtgttgaag
aaacgttcattgtcacctgctagtttttcagatcagcacattgctaaaaatggccatcaa
gtcagtaaatttggacgaagaattgtcaaagctgttacatacagagttaagtctgtccct
tcctctgccaaagttgaaccaagtgaggtctctagtagagaaactgaatccggaaaaaat
cctgagaaacccacaatagttaggttgggaaaatctccttcatacaaggatgttgcactt
gcaccaccagggaccatctctcaattgcaagctaatgttccccaaaatgatagttcaaat
gacgctgaggttgctgtagagaaaagtgaagatgctgtttgtaatcatttgagagaaaat
gttacatctgaaaaggaagatgtcaaggtggtcaatgtcaaagagattaacgagtgttct
ttgtcggattccaaggaatcgtcatcaccaggtcacgaggttaaggtcgaaaaattatcc
gatgatgttgcaacaaatgttgatacttctggaatggttccttcgattgttgacaaggct
gagagtgatacaattgacatccatgaagtggttcctgagaacgagcccataaataattca
acaacaaattcaataagttcttcgaaagaggtcaagtttgagatggacatttcttgcagc
actcaaatagagcatgcatctccattgcaaggagaggagcatttggaagacaaaccaatg
attacaaatttgagtgatgcaagagattttccaagcaaaaagctgtcagcttctgctgta
ccattcaacccatcaccaatcattccacgctcagctccaatgcctttaaacatgaatctt
ccttctggtccaggtgctgttccagctgtaggcccctggccaatgaacatggcccttcac
cctgggcctgctacagtaatgccagctgtcaatcctttgtgctcctcacctcaccatgcc
tacccatctcctccacctacaccaaatattataccaccagtgccttttatgtatcctcct
tatagtcaggctcagcctgtgccactcaatagttttcctccaaatggaaatcattttcgt
cgcagtcattatgtgtggcaatgcaacatgaacccccctacaccagaatttatccccaca
actatttggcctggttgccgtccagttgaattctctgtaattccacctgtgactgaacca
atttgtgaacctaatttagagcaacgggtacaatctccaatctctgagggaagccaaggc
ttggtccctcttctgcctgatgatataagtagcggggaggagacaaagaaagtggtgctt
ccccttcctgaagtggtacatgattcggcttggattgggttggagaatgagaaaccaaac
gagggccgtacttgcgaggataatattgggactacaccagtttacagtgatgctctcaaa
gaaaaatctggagataatgttgaggttactaggcttagtcatcatgttgaggatgatgaa
agaactttcagcattttaattcgagggaagagaaaccgaaagcaaactttaagagtgcca
ataagtttgcttagaagacctcattgttcacaatcattcaaagttgcatacagcagagtt
ttgcgagacagtgaaatttctaggcccttgacatcttgtgaaactaacttagcaacatga
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