Amaranthus tricolor (tampala): 130809627
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Entry
130809627 CDS
T09367
Name
(RefSeq) UV-stimulated scaffold protein A homolog
KO
K23720
UV-stimulated scaffold protein A
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
130809627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atri03400
]
130809627
DNA repair and recombination proteins [BR:
atri03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
130809627
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
VHS
NT_N
Motif
Other DBs
NCBI-GeneID:
130809627
NCBI-ProteinID:
XP_057531346
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All DBs
Position
4:complement(2047769..2051577)
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AA seq
678 aa
AA seq
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MNLIQRNINPKNTPTMAGEQIEEVRESGKVMAIIEKATNSTESEVDPRLLKAIKTIVRYS
DFELKLAAQTLMHHMKRQHSQIRYLALLIIDELFMRSKLFRTIITENLDQLLSLSVGFRR
NQPLPAPSNVASVLRLKAIEFLEKWNASFGIHYRQIRLGYDYLKNTLRYQFPNLQANAAR
IERERREREMKTQEILTNKFESLRESLPSLREEIKSTIDEIGECLDIARANDENAMLEPL
DDDDEEEFERIRNPELQQIRLDALKEAEKVHENSENKVVFDTLRELFKLLVTKHLVSVQE
WISILIRVEVDDTRFRDSALKEFIDIRNQITAVKKKCEESGCALPKIKDSEDDDIWEEGT
IEYAEITNSLTTVQTGSMSLDTDVPECSNSGANNKGVVKRRAGAGVWDPLKEKLLAEAPV
VKWGSSLDNWGEKRDALANQRGLELDGHWGRVDYDATIPSEKIAELNVHASVYKEEEVEI
HPCRALLRNGKLCQRKDLRVCPFHGPIIPRDDEGRPIYPENAGKAANSVDDEGTFMRQCS
STEEMCIDGKGISKEHLAKLAVKNVREKDKEVMKMKERAIKKAKLAKVREHNDAVLREAA
MASTSTSAAFGDVDQGATEVRSTMRTQKKTLASMVRKKVTAKDRVAEKLLSTRARDATIK
QLTQGEDNRYRESFPNQW
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgatacaaagaaatataaatcctaagaataccccaacaatggcgggtgaacaa
attgaagaggttagagaaagtggaaaagttatggcgattattgagaaggcaaccaattca
actgaatcggaagttgatcctcgtcttctcaaagctataaaaactattgtacgatactcc
gattttgagctcaaactcgctgctcaaaccctgatgcatcacatgaaacgacaacactct
cagattaggtatcttgcgttgttgataattgacgaattatttatgcgatcaaagcttttt
agaactataataacggagaatttagatcaattgctaagtttatcggttggatttcgacga
aatcaacctctaccagctccgtcaaatgttgcgtcggttttgagattgaaagccattgag
tttttagagaaatggaatgcgtcatttggaattcattataggcagattaggttagggtat
gattatttaaagaatacacttaggtaccaatttcctaatttacaggcgaatgcagcgagg
attgagagggagaggagagaaagggagatgaagacacaagagattttgacgaataagttt
gagtcattgagggaaagtttgccatcgttgagggaggagattaagtcaaccattgatgag
attggggagtgtttagatattgctagagctaatgatgagaatgcgatgctggaaccgttg
gatgatgatgacgaggaggagtttgagaggattcggaaccctgaattgcagcagattcgg
cttgatgcactgaaggaagcggagaaagttcatgaaaatagtgaaaataaagtagtgttt
gatacattaagggagttgtttaagttgttagtgacaaaacatttagtttcggtgcaagag
tggatatctattcttattagggtagaagttgatgatactaggtttagggattctgcgtta
aaagagtttattgatattcgaaaccaaattactgcggtgaagaagaaatgtgaggaatct
ggttgtgctcttcctaagatcaaggatagtgaggatgacgatatttgggaggagggtaca
attgaatatgcggagataactaatagtttaacaactgtacaaactggatctatgtcattg
gatactgatgttcccgaatgcagcaatagtggggcgaataataaaggtgttgtgaaacgt
agagcgggtgctggtgtttgggatcctttgaaggagaagcttttagctgaagctcctgtc
gtcaaatggggatcctcgttggataattggggtgagaagagggatgccttagctaaccaa
agaggattagagctagatggtcattggggcagggtggattatgatgctaccataccatct
gaaaagattgctgagctaaatgtgcatgcaagtgtttacaaagaggaggaagtggaaatt
catccttgtcgtgctcttttgcgcaatggaaagctttgtcaaaggaaagatttgagggta
tgcccgtttcacggtccaattataccgcgtgatgatgagggtagacctatttatccagag
aatgcagggaaagctgccaattcggtggatgatgaaggtacattcatgaggcaatgctct
tcaactgaagaaatgtgtattgatggaaagggcatttcgaaagagcaccttgctaaacta
gcagtaaaaaacgtcagagaaaaggacaaagaggtgatgaagatgaaagaacgagcaatt
aagaaagccaaactggcaaaggttcgggaacacaatgatgcagttcttagagaggctgca
atggcttcaacctcaacctcagcagcttttggggatgttgatcagggagccacggaagtg
agatctaccatgcgaactcaaaagaagactcttgcatcaatggtgcggaagaaagtgaca
gcaaaagatagagtagcagagaagcttttgagtacccgagctagagatgcaaccatcaaa
cagctaactcagggagaggataacagataccgtgaatcattcccaaatcagtggtag
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