KEGG   Amaranthus tricolor (tampala): 130809644
Entry
130809644         CDS       T09367                                 
Name
(RefSeq) cullin-1-like isoform X1
  KO
K03347  cullin 1
Organism
atri  Amaranthus tricolor (tampala)
Pathway
atri04120  Ubiquitin mediated proteolysis
atri04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:atri00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    130809644
   04120 Ubiquitin mediated proteolysis
    130809644
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:atri04121]
    130809644
Ubiquitin system [BR:atri04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Cullin
     130809644
SSDB
Motif
Pfam: Cullin Cullin_AB Cullin_Nedd8 DUF6407 DUF3232 Methylase_S
Other DBs
NCBI-GeneID: 130809644
NCBI-ProteinID: XP_057531372
LinkDB
Position
4:2281424..2290566
AA seq 740 aa
MNDIKLEDRWPIVVCGVEKVLRLIENHPDETSFDGPMHIELYSTIYNFVRINPLHYPKQI
YEHYKQALVDYVNMTVLPALNELHDEYLLMVLVHRWSNYKVLMRWLTRSFTCIERIQIYR
RSMSLPSFQDAGLFVFFDLVYNQIYVRAKDAVLALINVERLGGQIDRTLLKNVIGIFVEI
GMGYMYEYENHFETYFLDDTTTYYSREASRWILQNSCPEYMLKSEECLKKEKNRVSDYLH
VSSEEKLLKRVQNELLLAYENQLLEKENSGFRVLLKDDKVEDLSRMFKLYSKVPKGLEPI
GTLFKQYICDEGIALIQQAEDAAICKSENSTADCSHEQVLVRKVILLHDRFMAFVIDCFA
SHAIFLKSLKEAFDVFLNKTVAGCSTAELLASYCDIIIKKGGSEKLSDEAIEESLEKVVM
LLAYVMDKDMFVEFYRKKLSCRLLFDKNGNDEHDKRFLAKLKQHYGAHFTSKMEGMVADL
MRKSVIQIHFEEHLQHNPNAQPGLDLTVTVLTTGYWPSYKTSDFNLPTEMLRCVESFEKF
YKIIKENRILSWIHSFGSCHLTATFGQKTMDLVLGTYQAAALLLFNTADCLSYSEIATLL
NLPDEFLVRVLQSLSCAKYKILIKKPYSKTVSQTDSFLFNSKFTDRMRRIKIPLPPMDEA
KKIVEDMDKDRRFAIDAIIVRIMKSRKVLGYQQLVAECVEQQARSFKPDFKQIKKRLEDL
ITRDYIERDTDDPQLFRYVA
NT seq 2223 nt   +upstreamnt  +downstreamnt
atgaatgatattaagttggaggataggtggcctattgtggtttgcggagttgagaaagtg
ttgagacttattgaaaaccaccccgatgaaacttcttttgatggtcctatgcacatagag
ctttactcaactatatacaacttcgtccgtataaatccacttcattatcctaagcaaatt
tatgagcattacaagcaggcacttgtggattatgttaatatgacggttttaccagctttg
aatgaattacatgatgaatatttgctgatggtactagtgcatagatggtcgaattataaa
gtactgatgaggtggctaactcgttccttcacatgcattgagcgcatccaaatttataga
aggtcaatgtcacttccttcgtttcaagatgctggactgtttgtattttttgacctggtt
tacaatcaaatatatgtcagagcaaaggatgctgttttagctctgataaatgtagaaagg
ttgggtggccagattgaccgaacattactgaaaaatgtaattgggatatttgtcgaaatt
ggaatgggatatatgtatgaatatgaaaatcattttgagacatattttctggacgatact
actacttactattcgcgggaggcctcaaggtggattttacagaattcatgtccagaatac
atgttgaagtctgaggaatgtttgaaaaaagaaaagaatagggtgtctgattatttgcat
gttagcagtgaagagaagcttctgaagagagtgcaaaatgagttgttgttggcatatgaa
aaccaattgcttgagaaagaaaattctggatttcgtgtactacttaaagacgacaaggtg
gaggatttatccaggatgttcaagctatatagtaaagttcccaagggtttggagcccatt
ggaaccctttttaagcaatatatctgcgatgaaggaattgctttgatccagcaagccgaa
gatgctgcaatctgcaagtctgaaaattctactgctgattgttcacacgagcaggtcctt
gtgaggaaagtaatactgctacatgataggtttatggcttttgtgattgattgctttgcc
agccatgctatctttctcaagagtctcaaggaagcttttgacgtctttttaaacaagact
gttgctggttgttctactgcagaacttctggcatcttattgcgatattattatcaaaaaa
ggtggtagtgaaaagctaagtgatgaagctattgaggagtctcttgagaaggtggtaatg
cttcttgcttatgtgatggataaagatatgtttgtagaattttacagaaagaagctctct
tgtcgtctactctttgacaagaatggcaatgatgaacatgataaacgttttttggcaaag
ttaaagcagcactatggtgcacattttacatcaaagatggaaggaatggtagctgatttg
atgaggaagagtgtgattcagattcattttgaagaacatcttcaacataatccaaatgca
caacctggtcttgatcttactgtgacagttctcacaaccggatattggccaagctacaaa
acctctgattttaaccttcctactgagatgttaaggtgtgtggaaagttttgagaagttc
tataaaataataaaagagaacaggattctctcttggattcactcattcggaagctgccac
ctcaccgctacatttggtcagaaaacaatggatttagttcttggaacctatcaggctgct
gctctgctcctattcaacacagcagattgcttgagttattcagaaattgctactctacta
aatttacctgatgaattcttggttagagtacttcaatcattgtcttgtgcaaagtacaag
attcttatcaaaaaaccgtactcaaagacagtatctcagactgatagtttcttgttcaat
tcgaagttcaccgaccgaatgaggaggataaagattcctcttcccccaatggatgaggcg
aaaaagattgtcgaagatatggacaaagatcggcgattcgccattgatgccattattgtg
cgcataatgaaaagtaggaaggtgttagggtatcagcaattagtcgccgagtgtgttgag
cagcaagctcgcagtttcaagcctgatttcaagcaaattaagaagaggctagaggatttg
attacaagagattacattgaaagggacacggatgatcctcagttgttccggtacgtcgcc
tga

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