Amaranthus tricolor (tampala): 130809644
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Entry
130809644 CDS
T09367
Name
(RefSeq) cullin-1-like isoform X1
KO
K03347
cullin 1
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri04120
Ubiquitin mediated proteolysis
atri04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130809644
04120 Ubiquitin mediated proteolysis
130809644
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atri04121
]
130809644
Ubiquitin system [BR:
atri04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Cullin
130809644
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Ortholog
Paralog
GFIT
Motif
Pfam:
Cullin
Cullin_AB
Cullin_Nedd8
DUF6407
DUF3232
Methylase_S
Motif
Other DBs
NCBI-GeneID:
130809644
NCBI-ProteinID:
XP_057531372
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All DBs
Position
4:2281424..2290566
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AA seq
740 aa
AA seq
DB search
MNDIKLEDRWPIVVCGVEKVLRLIENHPDETSFDGPMHIELYSTIYNFVRINPLHYPKQI
YEHYKQALVDYVNMTVLPALNELHDEYLLMVLVHRWSNYKVLMRWLTRSFTCIERIQIYR
RSMSLPSFQDAGLFVFFDLVYNQIYVRAKDAVLALINVERLGGQIDRTLLKNVIGIFVEI
GMGYMYEYENHFETYFLDDTTTYYSREASRWILQNSCPEYMLKSEECLKKEKNRVSDYLH
VSSEEKLLKRVQNELLLAYENQLLEKENSGFRVLLKDDKVEDLSRMFKLYSKVPKGLEPI
GTLFKQYICDEGIALIQQAEDAAICKSENSTADCSHEQVLVRKVILLHDRFMAFVIDCFA
SHAIFLKSLKEAFDVFLNKTVAGCSTAELLASYCDIIIKKGGSEKLSDEAIEESLEKVVM
LLAYVMDKDMFVEFYRKKLSCRLLFDKNGNDEHDKRFLAKLKQHYGAHFTSKMEGMVADL
MRKSVIQIHFEEHLQHNPNAQPGLDLTVTVLTTGYWPSYKTSDFNLPTEMLRCVESFEKF
YKIIKENRILSWIHSFGSCHLTATFGQKTMDLVLGTYQAAALLLFNTADCLSYSEIATLL
NLPDEFLVRVLQSLSCAKYKILIKKPYSKTVSQTDSFLFNSKFTDRMRRIKIPLPPMDEA
KKIVEDMDKDRRFAIDAIIVRIMKSRKVLGYQQLVAECVEQQARSFKPDFKQIKKRLEDL
ITRDYIERDTDDPQLFRYVA
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatattaagttggaggataggtggcctattgtggtttgcggagttgagaaagtg
ttgagacttattgaaaaccaccccgatgaaacttcttttgatggtcctatgcacatagag
ctttactcaactatatacaacttcgtccgtataaatccacttcattatcctaagcaaatt
tatgagcattacaagcaggcacttgtggattatgttaatatgacggttttaccagctttg
aatgaattacatgatgaatatttgctgatggtactagtgcatagatggtcgaattataaa
gtactgatgaggtggctaactcgttccttcacatgcattgagcgcatccaaatttataga
aggtcaatgtcacttccttcgtttcaagatgctggactgtttgtattttttgacctggtt
tacaatcaaatatatgtcagagcaaaggatgctgttttagctctgataaatgtagaaagg
ttgggtggccagattgaccgaacattactgaaaaatgtaattgggatatttgtcgaaatt
ggaatgggatatatgtatgaatatgaaaatcattttgagacatattttctggacgatact
actacttactattcgcgggaggcctcaaggtggattttacagaattcatgtccagaatac
atgttgaagtctgaggaatgtttgaaaaaagaaaagaatagggtgtctgattatttgcat
gttagcagtgaagagaagcttctgaagagagtgcaaaatgagttgttgttggcatatgaa
aaccaattgcttgagaaagaaaattctggatttcgtgtactacttaaagacgacaaggtg
gaggatttatccaggatgttcaagctatatagtaaagttcccaagggtttggagcccatt
ggaaccctttttaagcaatatatctgcgatgaaggaattgctttgatccagcaagccgaa
gatgctgcaatctgcaagtctgaaaattctactgctgattgttcacacgagcaggtcctt
gtgaggaaagtaatactgctacatgataggtttatggcttttgtgattgattgctttgcc
agccatgctatctttctcaagagtctcaaggaagcttttgacgtctttttaaacaagact
gttgctggttgttctactgcagaacttctggcatcttattgcgatattattatcaaaaaa
ggtggtagtgaaaagctaagtgatgaagctattgaggagtctcttgagaaggtggtaatg
cttcttgcttatgtgatggataaagatatgtttgtagaattttacagaaagaagctctct
tgtcgtctactctttgacaagaatggcaatgatgaacatgataaacgttttttggcaaag
ttaaagcagcactatggtgcacattttacatcaaagatggaaggaatggtagctgatttg
atgaggaagagtgtgattcagattcattttgaagaacatcttcaacataatccaaatgca
caacctggtcttgatcttactgtgacagttctcacaaccggatattggccaagctacaaa
acctctgattttaaccttcctactgagatgttaaggtgtgtggaaagttttgagaagttc
tataaaataataaaagagaacaggattctctcttggattcactcattcggaagctgccac
ctcaccgctacatttggtcagaaaacaatggatttagttcttggaacctatcaggctgct
gctctgctcctattcaacacagcagattgcttgagttattcagaaattgctactctacta
aatttacctgatgaattcttggttagagtacttcaatcattgtcttgtgcaaagtacaag
attcttatcaaaaaaccgtactcaaagacagtatctcagactgatagtttcttgttcaat
tcgaagttcaccgaccgaatgaggaggataaagattcctcttcccccaatggatgaggcg
aaaaagattgtcgaagatatggacaaagatcggcgattcgccattgatgccattattgtg
cgcataatgaaaagtaggaaggtgttagggtatcagcaattagtcgccgagtgtgttgag
cagcaagctcgcagtttcaagcctgatttcaagcaaattaagaagaggctagaggatttg
attacaagagattacattgaaagggacacggatgatcctcagttgttccggtacgtcgcc
tga
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