Amaranthus tricolor (tampala): 130809683
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Entry
130809683 CDS
T09367
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 13-like isoform X1
KO
K14805
ATP-dependent RNA helicase DDX24/MAK5 [EC:
5.6.2.7
]
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
atri03009
]
130809683
Enzymes [BR:
atri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130809683
Ribosome biogenesis [BR:
atri03009
]
Eukaryotic type
Pre-60S particles
Helicases
130809683
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
130809683
NCBI-ProteinID:
XP_057531428
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All DBs
Position
4:complement(16739741..16751359)
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AA seq
749 aa
AA seq
DB search
MGKLSKQTPKSEELNLDALPWNSSLSITNNLEGGFLSLEEIDESQYNLTIPDSGKEVEVN
LKKRKRVVEDKVDDGNIKIDEEKKKKKKKKNMTKNVPTQVFETNVDELMDEDEFNAWHEL
RLHPLLMKEIYKLGFKQPTAIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIFQRLLD
EQEKVVNKQTLEDLDVAEIIAPRGLLRALIITPTRELALQVTDHLKAAAKSTKFRVVAIV
GGMSTEKQERLLKARPEIIVGTPGRLWELMSGGEKHLVELHSLSFFVLDEADRMIENGHF
HELQFIIDMLPANSGAIEKCSQDVQNCTTVSSFQRKKRQTLVFSATIALSADFRKKLKRG
TVKLKQSATYGLSSLEALSERAGLRPEAAIFDLTSESIMTSNLVESFLECSEEDKDAYLY
YMLRVHGLGRTIVFCSKNNASRHVAALLSTLDISVSVLNGERQQRARLKALDNFRKNKNG
ILVASDVAARGLDLPGVRMVIHYQLPRSAEVYVHRSGRTARASTDGCSILLVSSNERSKF
PFLCKSFGKDTLQRFPIDDSYMPEVRKRLSLARQIIKISLKDSKEKVKDSWIKRNAESIG
LDMEENDSEEERVDKCRQKKSTVMQLKKLQQELNVLLSRPLQPKSFSHRFLAGAGVSPML
QHQLEEIAQQKGSNDRSLKDNKRNLVMIGQVCVEPLQALRNRRAGPEQACLNMNINDLAE
KHRDMEKLRRKRKEAKRRDCHLIPLPMVF
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaacttagcaagcaaacacctaaatccgaagaactcaatctcgatgcccttcca
tggaattcttcgctctctattactaacaaccttgaaggagggtttttgtcattggaagag
attgacgagtcccagtacaatttgacgattcctgattctggaaaagaagtagaagttaat
ttgaagaaaaggaagcgagtagttgaagacaaagttgatgatggtaacattaagattgat
gaagaaaagaagaagaagaagaaaaagaagaacatgacgaaaaatgtaccaactcaagtt
ttcgagaccaacgttgacgagttaatggatgaagatgaattcaatgcttggcatgagctg
aggcttcacccacttcttatgaaagaaatatacaagcttggatttaagcagccaacagca
attcaaaaggcctgtattcctgccgctgctcatcagggaaaggatgttattggtgctgca
gagactggttctgggaagactcttgcttttggtttgcccatcttccaacgccttcttgat
gagcaagaaaaggtggtgaacaaacagaccctagaagatctggatgttgctgagataatc
gcaccaagaggcctgttacgagctttaataataacccctacaagggaacttgccctacag
gttactgatcatctcaaagcagcagcgaaatctaccaaatttcgggtggttgctattgtt
ggtgggatgtcaacagagaagcaagagaggcttttaaaagctaggcctgaaattattgtt
ggcacacctggtaggctgtgggaacttatgtcaggaggagagaaacaccttgttgagtta
cattcattgtctttctttgtgctggatgaagcagatcggatgattgagaatggacatttt
catgagttacagttcataattgacatgcttcctgcaaatagtggagctattgagaagtgt
tcccaggatgtgcagaattgcacaactgtctctagcttccagaggaaaaaacgtcaaact
ctagtgttttctgcaacaattgcattatctgccgacttccgtaaaaagctaaaacgtgga
accgttaaactaaaacagtcagcaacgtatggattgtcatctctagaagctttatcagaa
agagcaggattgagacctgaagctgcaatttttgatttgaccagtgaatcaataatgact
agcaatcttgtggagtcctttcttgagtgtagtgaagaagacaaggatgcctacttgtat
tacatgttgcgtgttcatggcctaggccggacaattgttttctgctcaaaaaataatgcc
tcacgtcatgttgctgcccttttaagcacccttgacatcagtgtttctgtccttaatggt
gagaggcagcagcgagctcgattaaaggcacttgataactttcgcaagaataagaatgga
atacttgtagctagtgatgttgctgccagaggactggacctacctggagttcgtatggtt
atccactatcagcttccacgttcagcagaagtttatgtccatagaagtggacgaactgct
agagcttctactgatggatgcagtatattactagtctcatcaaatgagagatcaaaattt
ccctttctgtgcaaatcttttggcaaggatactcttcagcgttttcctattgatgactct
tacatgccagaagttaggaagcggttatctcttgcacgtcaaataattaagatttcattg
aaagactcaaaggaaaaagtaaaggacagctggatcaaacgcaatgctgagtcaatagga
ctagatatggaagaaaatgacagtgaagaagaaagagttgacaaatgcaggcaaaagaaa
tctaccgtaatgcagttgaagaaactccagcaggagctcaacgtgctgctatcacgtcca
ctgcagccaaagtccttttcgcatcgcttcttggctggggctggtgtttcccctatgctg
cagcatcaactagaagagatagctcagcagaaagggagcaacgacagaagtctaaaagat
aacaaaaggaatttagttatgattggtcaggtttgtgtagagcctctccaggcacttcgg
aatcggagggctggtcctgagcaggcatgcctgaatatgaatatcaatgatctcgcagag
aagcaccgagacatggagaagttgagaagaaaacgaaaagaggccaaaagaagagactgc
cacttgatccccctccctatggttttttaa
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