Amaranthus tricolor (tampala): 130809685
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Entry
130809685 CDS
T09367
Name
(RefSeq) uncharacterized protein LOC130809685 isoform X1
KO
K23325
transducin beta-like protein 2
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
atri03012
]
130809685
Translation factors [BR:
atri03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
130809685
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Ge1_WD40
Beta-prop_WDR90_POC16_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR75_2nd
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_HPS5
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_DCAF12
WD_LRWD1
Beta-prop_EIPR1
Beta-prop_Nup120_160
LapA_dom
Motif
Other DBs
NCBI-GeneID:
130809685
NCBI-ProteinID:
XP_057531434
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Position
4:complement(16873459..16893447)
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AA seq
442 aa
AA seq
DB search
MDPLLPIVLLSTILGAIIMFLVFGNYFRKQKSEVEALAKAEPLDGVNPKKSSKPNPASKK
SQFKHRTHAAEKEQNKKHHPLDINTLKGHGDSVGGLCFSSDGKNLATACMDGVVRVFRLE
DISSKSFKFLRINMPAGNQPVAVAFLEDDSSVVVASQALSGASLHMYAEEKGKSSGGGKQ
QDKLPLPEIKWEHNKVHDKHGILNLFGTTASYGSADGSAVIASCSEATEIKLWHGKTGRL
LGTVDTNQLKNHMAVISPNGRFLAAAAFTADVKIWEIIYLKDGSVKEINKAMQLKGHKSA
VTCLCFTPNSDQVITASKDGTLKVWNINVRYHMDEDPKILRGFPIPLQDSKGAILHYDHL
SLSPDGKILAATHGSTLQWLCIETGKILDTAEKAHDGNITWITWAPKTLSVVFLAVNSES
FILGTSGVDKKVKLWLAPPIHS
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggatccactacttccgatcgtacttctatctacaattcttggagccatcatcatgttt
ctcgttttcggcaattacttccgaaagcagaaatctgaagttgaagcacttgctaaagct
gagcctcttgatggtgtgaaccccaagaagtcatcgaaacctaatcctgcttcgaagaag
tcgcaatttaagcaccgtactcatgccgctgaaaaggagcaaaataagaagcatcatccg
ttggatattaatacattgaaaggtcacggtgattcagttggtggtttgtgtttctcatca
gacggaaaaaatttagctacagcttgcatggatggtgttgtccgtgttttcaggctggaa
gatatttctagtaagagcttcaagttcttgcgtattaatatgccagctggaaaccaacca
gtagctgttgcatttttagaggatgattcatcagttgtagtggctagccaagctctttca
ggtgcctcgcttcatatgtatgcagaggagaagggaaaatcttctggtggaggtaaacag
caagacaagcttcctcttcctgaaattaaatgggaacataacaaagtccatgacaagcat
ggaatattgaacctctttgggactactgcaagctatggaagtgctgacgggagcgctgtc
atagcttcctgttcagaagccactgaaattaagctttggcatgggaaaaccggaaggcta
ttaggcactgttgatactaaccaactgaaaaaccacatggctgtcatatctccaaatgga
cgttttttggctgctgcagcatttacagctgatgtgaagatatgggagatcatttacttg
aaggatggttctgttaaggagataaataaggccatgcagctcaagggacacaagagtgca
gtaacttgtttatgctttactccaaactcagatcaagtgataacagcatccaaggatggc
acccttaaagtatggaatatcaatgttcgttatcacatggatgaggatcctaagattttg
agaggatttccaattcctcttcaagattcaaaaggtgcaattttacattatgatcatctt
agtttgtctcctgatggaaagatacttgctgctactcatggttccactttgcaatggctg
tgtatcgagactggaaagattttggatacggctgaaaaggctcatgacggtaatattaca
tggattacatgggcacccaaaaccctttctgttgtttttcttgcagtgaactcagaatcc
ttcatcttgggaacgtctggagttgacaagaaagttaagttatggctggctcctccaatt
cattcatga
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