Amaranthus tricolor (tampala): 130809755
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Entry
130809755 CDS
T09367
Name
(RefSeq) protein transport protein SEC23 C
KO
K14006
protein transport protein SEC23
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130809755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atri04131
]
130809755
Membrane trafficking [BR:
atri04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
130809755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
NTF2_MEX67
Vps36-NZF-N
Motif
Other DBs
NCBI-GeneID:
130809755
NCBI-ProteinID:
XP_057531528
LinkDB
All DBs
Position
4:9179029..9201437
Genome browser
AA seq
769 aa
AA seq
DB search
MAEFIDLENHDGVRMPWNVIPGTKQELNNSVIPLSLLYTPLKPFPDLLILPYSPLRCRSC
RSILNPFSVIDYAAKIWICPFCYSRNHFPPHYASISDENLPAELFSQYTTIEYEPPSEIH
TQSHTPPVYLFVVDNCLIEEEVGYLKSALSQALDLISDNSLVGLITFGSYVQVHELGFSG
GGSGIPKCYVFKGSKEFSKDQIVEQLAFFANRPKPASGVVAGVRDGLSAESIARFLLPAS
ECEFTLKTLLEELQKDPWGVPTDQRPNRCTGTAISIAAHVLGACVPGSGARILAFVGGPS
TEGPGAIVSKNLSEPIRSHKDLDKDSAPHYHKAVKFYEGIAKQLVHQGHVLDLFACALDQ
VGVAELKVAVEKTGGLVVLAESFGHSVFKDSLKHVFQTGEYDLGLASNGIFEVSCSSDMK
IQGILGPCASLEKKGLACSETVIGQGNTSSWKLCGLDKATTLCLFFDIAKKESPDAIGQA
TSNLFYLQFLTYYQHVSGRMRLRITTLSRRWVAGPGSTPELIAGFDQEAAAVTMARLVSF
KMENEAEFDPIRWLDRSLIRLCSRFGDYQKENPTSFSLSPRFSIFPQFIFHLRRSQFVQV
FNNSPDETAYFRMILNRENVANSVVMIQPSLISYTFHSSPEPALLDVAAVAADKILLLDS
YFTVVIFHGVNIAQWRKAGYQDMPEHKAFAELLKAPRDDADALIKERFPVPRLVICDQYG
SQARFLLAKLNPSSTYNSGASLAPGGDLIFTDDVSLEVFLDHLQRLVVQ
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggcggaattcatagatttagaaaaccatgatggagtacgaatgccatggaatgtaatc
ccaggcacaaaacaagaattaaacaattcagttataccactttctcttctttacactcca
ctaaaacctttccctgatctattaattcttccttactctcctcttcgttgtcgatcttgt
cgttccatcctaaaccctttttccgtaattgattatgctgccaagatttggatctgcccc
ttttgttatagtcgcaatcatttccctcctcattacgcttcaatttctgatgagaatctt
ccggctgaattgttttctcaatacactacgattgaatatgaacctccttcagaaattcat
acccaaagtcatactccaccagtttatttatttgttgttgacaattgtttgattgaagaa
gaagttgggtatttgaaatctgctttgtctcaagctttggatttgatttctgataattct
cttgttgggttgatcacatttgggagttatgttcaagttcatgagttagggttttctggt
ggaggtagtgggattcctaagtgttatgtttttaaaggttctaaggagtttagcaaagat
cagattgtggaacagttagctttttttgctaataggccaaaaccggcttcgggtgttgtt
gctggtgtaagggatgggttatctgctgagagtattgctcgatttttgttaccggcttct
gagtgcgagtttaccttgaaaacgttactggaggagcttcagaaagatccttggggagtg
ccaactgatcagaggccaaataggtgtacaggaactgcaatcagtattgcagcccatgta
ttgggagcttgcgttcctggatcaggagcgaggattttggcttttgttggtggtccatca
acagaagggcctggtgctattgtctcgaaaaatttatctgagccaatccgttcacacaag
gacttggataaagattctgctcctcattatcataaggctgtaaaattctatgaaggaatt
gcaaagcagcttgtgcaccaagggcatgttcttgacctttttgcttgtgcacttgatcag
gttggagttgctgaacttaaagttgctgttgagaagactggtggtcttgtggtccttgcc
gaaagttttggacattcagtttttaaggattctcttaagcatgtattccagaccggggaa
tatgaccttggactagcatcaaatggtatatttgaggtaagctgctccagtgacatgaag
attcagggaattctcggtccttgtgcatcacttgaaaagaaaggtctcgcttgttcagaa
actgttattggtcagggcaacacaagttcatggaagttgtgcggccttgataaagctaca
actttgtgtttattttttgacattgcaaagaaggagagccctgatgctattggtcaagcc
actagcaaccttttttacctgcagtttttgacctattatcaacatgtaagtggtcgtatg
cgactccgtattacgactctttctaggcgatgggttgctggtccaggaagcactccggaa
ttaattgcggggtttgatcaagaagcagcagctgttactatggcacgtttagtttcgttc
aagatggagaatgaggcagagtttgatccaatacgatggcttgacagatcattgatacgt
ctatgttcaagatttggagattaccaaaaagaaaatccaacctctttcagcctatctcca
aggttttcaatatttcctcaatttatatttcatctaaggagatctcagtttgtacaggtg
ttcaacaacagtcctgatgagactgcatactttagaatgattcttaaccgggagaatgta
gccaactcagtagtgatgattcagccctcattgatttcctataccttccattcctcacct
gaacctgctcttctagacgttgcggcagttgctgccgacaagatattgttactggattca
tacttcactgttgttatttttcatggtgtcaatattgctcagtggcgcaaggccggatat
caggatatgcctgaacataaggcctttgccgaattgttgaaagctcctcgagatgatgct
gatgctttgataaaagagaggtttccagttccacgcttggtcatttgtgatcagtatggc
tcccaggctcggtttcttctggcgaagttaaacccttcatctacgtacaattctggtgcc
tctcttgctcccggtggagatctcattttcacagatgatgtcagcttagaggtgttcttg
gatcacctgcaaaggcttgttgttcaataa
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