Amaranthus tricolor (tampala): 130809862
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Entry
130809862 CDS
T09367
Name
(RefSeq) long chain acyl-CoA synthetase 9, chloroplastic
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri00061
Fatty acid biosynthesis
atri00071
Fatty acid degradation
atri01100
Metabolic pathways
atri01212
Fatty acid metabolism
atri04146
Peroxisome
Module
atri_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
130809862
00071 Fatty acid degradation
130809862
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
130809862
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
atri01004
]
130809862
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
atri04147
]
130809862
Enzymes [BR:
atri01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
130809862
Lipid biosynthesis proteins [BR:
atri01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
130809862
Exosome [BR:
atri04147
]
Exosomal proteins
Exosomal proteins of breast milk
130809862
Exosomal proteins of breast cancer cells
130809862
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
130809862
NCBI-ProteinID:
XP_057531681
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Position
4:24580124..24591118
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AA seq
694 aa
AA seq
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MNPYVVGLLVPIVFTLISRNTKRGKKRGLPVDVGGEPNYAIRNAQFTDLVTSPWEGILTL
AELFEKACEKHKDKPLLGTRTLLAKETEVTKDGKSFEKLHLGEYEWLSYGKTFEAVCNFS
SGLAQLGHTRNERAAIFADTREEWFIAMQACFRRNITIVTIYASLGEEALSHSLNQTEVT
TVICGQKEMKKLVDISGQLDTVKRIICMDDEFSSNVSLVEESWTVISFAAVEKLGRENPA
DAYLPLPTDVAVIMYTSGSTGLPKGVMMTHGNVLATVSAVMTIVPGLGSKDVYLAYLPLA
HILELAAESIASAIGGKIGYGSPLTLTDTSNKIKRGTKGDASVLAPTIMAAVPAILDRVR
DGVRKKVDAKGGLSKRLFEFAYNRRLSAMNGSWFGARGPERIIWDLLVFNKVRAVLGGRI
RFILSGGAPLSGDTQRFINICIGAPIGQGYGLTETCAGGTFTEYDDTSVGRVGPPLPCSF
IKLIDWPEGGYLVSDKPMPRGEIVVGGPNVTLGYFKSEDKTDEVYKVDEKGMRWFYTGDI
GRFHDDGCLEIVDRKKDIIKLQHGEYVSLGKVEAALITSPYVENIMLHCDPFRSYCVALV
VASEPALRDWAARQQISFNDFPELCEKDETIKEVLGSLIKEAMNARLEKFEIPARIKLLR
EPWTPESGLVTAALKLKREVIKKAFSDELTALYS
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgaatccttatgtggttggacttcttgtccctattgttttcactcttattagtcgaaat
accaagcgtggcaaaaaaagagggttgcctgttgatgttggtggtgaacctaactatgca
attaggaatgctcagtttactgaccttgtgacatcaccatgggagggtattttgacactg
gcggagctttttgaaaaggcatgtgaaaagcacaaagacaagccccttcttggaaccaga
acactacttgcgaaagagactgaagtaacaaaagatgggaaatcctttgagaaacttcat
ttgggagagtatgagtggctttcctatggcaaaactttcgaagcagtgtgtaatttttct
tctggtttggctcagcttggacatacgagaaatgaacgtgctgcaatttttgctgataca
cgagaggaatggtttattgcaatgcaggcttgtttcaggcgcaacattaccatagtgaca
atatatgcttctcttggagaggaagccttgtcccattcactgaatcagactgaggtcacg
acggtaatttgtgggcagaaagaaatgaaaaagcttgtggacatcagtggacaacttgac
actgtaaagcgtattatatgtatggatgatgagttctcttctaatgtctctttggtggaa
gaaagctggactgtcatttcatttgctgcggtggaaaagcttggacgagaaaatccagct
gatgcttatttacctctaccaactgatgttgccgtgattatgtatacaagtgggagtact
ggcttaccgaaaggggtcatgatgactcacggtaatgtacttgcgacagtttcggcagtc
atgactattgttcctggacttggaagcaaagatgtttatttagcgtatttacctctagct
cacatcctggaattggctgctgagagcatagcatctgcaattggaggtaaaataggatat
ggttccccgcttacactgacagacacatcaaacaagataaaaaggggtactaagggagat
gcttctgtgttagcacctacaataatggcagctgtgccagcaattctagaccgagttcga
gatggtgtacgcaaaaaggttgatgcaaagggtggactctccaaaagattatttgaattt
gcatataatcgccgcttatctgcaatgaatggtagctggtttggtgcaagaggtcctgag
aggattatttgggatttgttagtgtttaataaggttcgagctgtgcttggaggtcgtata
cgctttattctgtccggaggtgcacctctttcgggtgatactcaaagattcatcaatatt
tgcattggtgccccaataggtcaaggttatgggcttacagagacctgtgctggtggaaca
tttaccgagtatgatgatacttcagttggtcgtgttggtcctcctcttccttgctcgttc
attaagttaatagattggcctgaagggggatatcttgtgagcgataaacccatgcctcgg
ggagaaatcgttgttggtggtccaaatgtcacacttggatatttcaaatctgaggacaaa
accgatgaagtgtacaaggtcgatgagaaagggatgaggtggttctacactggtgacata
ggacggtttcatgatgatggttgcctagagatagtcgaccgcaagaaagacatcattaaa
cttcagcatggagagtatgtttctttaggaaaggttgaggcagctttgattacaagtccg
tacgttgaaaacatcatgctgcattgtgaccctttccgtagctattgtgtggctcttgtg
gttgcttcagagccagcccttcgagattgggctgccaggcaacaaattagtttcaatgat
ttccccgaattatgcgagaaagatgaaactataaaagaagttcttggatccctaataaaa
gaagcaatgaacgcccgactggaaaaatttgagatcccggcaagaatcaaactgcttcga
gaaccgtggactccagaatcgggattagtaacagctgcgttaaagctcaaaagagaggtt
atcaagaaggcattctcggacgagcttactgcgttatactcgtga
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