KEGG   Amaranthus tricolor (tampala): 130809909
Entry
130809909         CDS       T09367                                 
Name
(RefSeq) SWI/SNF complex subunit SWI3C
  KO
K11649  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
atri  Amaranthus tricolor (tampala)
Pathway
atri03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:atri00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    130809909
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:atri03021]
    130809909
   03036 Chromosome and associated proteins [BR:atri03036]
    130809909
Transcription machinery [BR:atri03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     130809909
Chromosome and associated proteins [BR:atri03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    130809909
   PBAF complex
    130809909
   GBAF(ncBAF) complex
    130809909
SSDB
Motif
Pfam: SWIRM-assoc_1 SWIRM Myb_DNA-binding Myb_DNA-bind_6 ZZ
Other DBs
NCBI-GeneID: 130809909
NCBI-ProteinID: XP_057531748
LinkDB
Position
4:24024875..24038131
AA seq 763 aa
MPTSPSDNRHKRRKARGPKITKRHRGIDDEEEDEEEDNDVAIEADEDEDLHPNPKNVQNP
RIEPEVISSSSVKISDFPAAVKYNVNRPHSSVLAIVAAERYRDHKAQPLAVLENISYGQL
QVLSAVPADSSAFGSSSLGDQDSPVVITPPPIMEGRGLVKKFWNRPHLLPFHAEWFQPTT
VHRLERQVVPHFFSGKAAELTPEKYLDYRNSIVAKYMESPEKRLLIGDCQELIVGVDKED
LSRIFRFLDHWGIINYCAPLPPHDSWSVESYLKEDPNGEVHVPAAMLKSIDSLIKFDLPK
ARLKSCDVSSSLIPNFDDHADLDSRIREMLSESHCNFCSQPLLVAYYQSVKEADTLLCSD
CYHEGRLVIGHSSIDFTKVDPTKESGDQQDGESWTDQETLLLLEALEIYNDNWNEIAEHV
GTKSKAQCILHFLRLPVEDSLLGKVEVPSSCSKTNGILKDKISRSHLNENGVSSGHQDHD
SDSEIRFPFVDSANPVMALVAFLTSAVGPRVAAACAHAALEALSEDDGLSNGNRMDLDDG
PVEVRNGNQSIDNVNSETSSLPAEKIKFAAKAGLAAAAMKAKLFADHEEREIQRLSANII
NHQLKRLELKLKQFAEVETLLMKECEQVEKTRQRLAGERARALATRYGPSGTGAGAGAAP
MGLPGVAPQANNNVSISRPPIVSPSASQHNVSGYSNSQVNHPQMSFLQRQQMFSFGPRLP
LSAIQPSSPGLPANVMFGAQGSDQSSPSHPLLRPVPGTSSGMG
NT seq 2292 nt   +upstreamnt  +downstreamnt
atgccaacttctccctcagataatcgccacaaaaggcggaaagcaagggggccgaagatt
acgaaaaggcaccgtggtattgacgatgaagaagaagatgaagaagaagataacgatgtt
gcaattgaggcagatgaagatgaggaccttcatccaaaccctaagaatgttcaaaaccct
agaattgaaccagaagtgatttccagcagttctgttaaaatctcggacttccctgccgct
gtaaagtataatgtgaaccggcctcattcctcggtcttggcaattgttgctgctgagaga
tatagagatcataaggcgcagcctcttgctgttttggagaatatatcgtatgggcagtta
caggtgttgtctgctgtgccagctgatagttctgcttttggtagttcaagtttaggggac
caggatagtcctgttgtgattacacccccacctattatggagggccggggcttggtaaag
aagttctggaacaggccccaccttcttccgtttcacgcagagtggtttcaacctacaacg
gtgcacaggttagaaaggcaagtggtgccacattttttttctggcaaggctgctgaactt
actcccgagaagtatttggactatcgtaattcaattgttgctaaatatatggaaagcccg
gagaagaggttattaattggtgattgccaagaattgattgttggtgttgataaagaagat
ctcagtcgaatctttcgtttcctagatcattggggcatcattaactactgtgctcctctg
cctcctcatgattcttggagcgttgagtcatatctaaaagaggatcccaatggtgaagtt
catgtaccagcagctatgttgaagtccattgatagtcttataaagtttgaccttccaaaa
gctaggttgaagtcttgtgatgtgtcctcatctttgataccaaacttcgatgatcatgct
gacttggacagtagaatacgagaaatgttgtcagaaagccactgtaatttttgttcccaa
cccctgttggttgcgtattatcagtcggttaaggaggctgatacattgctgtgttcagat
tgttaccatgaagggaggcttgttattggtcattcaagcatagattttaccaaggtagac
ccgacaaaagagagtggtgatcaacaagatggggaaagttggactgatcaggaaaccctc
ttactactggaggctcttgaaatctataatgataattggaatgaaatagctgagcatgtt
ggaactaagtccaaagcgcaatgcattctccactttcttcgtttgcctgtggaggacagc
ttactaggaaaagtggaagttccaagctcctgcagtaaaactaatgggatactaaaggac
aaaatcagcagatctcatctgaatgaaaatggtgtatcatcagggcatcaagatcatgat
tctgattcagaaattaggtttccgtttgtggattctgcaaatcctgtcatggctttggtt
gcatttttgacttctgctgtgggtcctagagtagctgctgcgtgtgcacatgctgctttg
gaagctctctcagaggatgatggtttatcgaatggtaataggatggacttagatgatggg
cctgtggaagtgagaaacggcaatcagtcaatagacaatgtaaattccgaaacctcttca
ttacctgctgagaaaatcaaatttgctgcgaaagctggtcttgctgctgcagcaatgaag
gcaaaactgttcgcagaccacgaagagcgagagatacaaaggctttctgctaatataata
aatcatcagctaaagaggttggaattgaagctgaagcagtttgctgaagtggagacctta
ttaatgaaggaatgtgaacaagtggagaaaacaaggcagaggctggctggagagagggct
cgggcattagcaactagatatggacctagtggaactggagctggagctggagctgcccca
atgggtttacctggtgttgctcctcaagctaacaataacgtaagcatcagcagaccaccg
attgtgtcaccatctgcttcacagcataatgtttctggttattccaatagccaagtcaat
catccacagatgtcattcttacaacgtcagcaaatgttctcttttgggcctcgattacca
ctttcagccatacaaccctcgtccccagggttgcctgcaaatgtcatgtttggtgctcaa
ggaagcgatcaatcttctccgagtcatccactattgagacctgtaccagggacaagctca
ggcatgggctga

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