Amaranthus tricolor (tampala): 130809953
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Entry
130809953 CDS
T09367
Name
(RefSeq) protein LATE ELONGATED HYPOCOTYL-like isoform X1
KO
K12133
MYB-related transcription factor LHY
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
130809953
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
atri03000
]
130809953
Transcription factors [BR:
atri03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
130809953
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_7
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
130809953
NCBI-ProteinID:
XP_057531810
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All DBs
Position
4:3383364..3401706
Genome browser
AA seq
734 aa
AA seq
DB search
MDNYSSGEELIVKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ
IRSHAQKFFSKLEKEAQVKGVPIGQAIDIEIPPPRPKRKPSNPYPRKTDAISSPNTQVRA
KDPAPTVDHVMDLAKEQLLEKPVGDVEEPNPEETDGSDKCTEALSLFQEAPSALRAAFSK
KPATAVGSARNLSDFKEFVPTKKPLVNNETSEFNAADGHNRDHKTDKPDGVVMVQNNSEN
ETIAAKTFPRHAPIQILEGSLASCSQGLSSDVSYQEPVFHQMGIPSQPALISNPTASATV
ESQTSTSRSSNHQMFPCFHPPFNPLPNNQEEYSSFQQMSSTFSSMIVSALLQNPAAHAAA
SFAASFWPPCANIENPVNSAPGNSGGFPPRPMNNPVPSVTAIAAATVAAATAWWAAHGMF
PLCAPLHTGFSFPPASTTAPLANFGQTPTANEEREENSFQHPGSPVQEPKQELSEALQLQ
QQSASKSPATSSSGSGNTSNAKVDSEVVANNDENVPAASDEKDTSKGKSKKQVDRSSCGS
NTPSGSDIETDALVKNDDGKEEDKEPDVSRAASESGNRRNRILGNLNDSWKEVSEGGRLA
FQALFSRDRLPQSFSPPQFLNGMRQELKGFTVEDNRQNAAESNDTTQLDLNSNTWESCSN
EQVVERNNKSKEENHKGLLTFSHDQGKPKTNRTGFKPYKRCPVEARESRVLNSSSPEQEK
CSKRLRLEGEAASI
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggacaattattcttccggtgaagaactaattgttaagactagaaaaccttacacgatc
acgaagcaacgagagcgatggacagaggaggagcataataggtttctcgaagccttgaaa
ttatatggacgagcttggcaacgaattgaagaacatattggaacaaagaccgctgtccag
ataagaagccatgcacagaaattcttttcaaagttggaaaaggaggcgcaagttaaaggt
gtccctatagggcaagcaattgacatagaaattcctcctccacgccctaaaaggaaacca
agcaatccttatcctcggaagactgatgctataagttccccaaatacgcaggtccgagca
aaagatcctgctcctactgtagaccatgttatggatttagcaaaagagcaacttcttgag
aaacctgttggtgatgtcgaggaaccaaaccctgaagaaacggatggaagcgataagtgt
actgaagccttgtcactttttcaagaagcaccatctgccctgcgagcagctttcagcaaa
aaacctgctactgcagttggatcagctagaaatttatccgactttaaggagtttgtgccg
acgaagaaaccactcgtcaacaatgaaactagtgaatttaatgctgctgatggacataac
agggatcataagaccgacaaacctgatggtgtggtgatggttcagaataattcagaaaat
gaaacaattgcagctaaaacatttcccaggcatgctcctattcagattcttgaaggaagt
ctggcatcatgcagtcagggtctttcttcagatgtatcatatcaagaacctgtatttcat
caaatggggatccccagccaacctgcattaatcagtaatccaacagcttctgctacagta
gaaagccaaactagcacgtcaagatcctctaatcaccaaatgtttccatgtttccatcct
ccatttaatccactccctaacaatcaagaagagtactcttcatttcagcagatgtcctca
actttttcaagtatgattgtttctgctctcctccagaatcccgctgctcatgctgcagca
agttttgcagcttcattttggccaccctgtgcaaatatagaaaatccagtcaattcggct
ccaggcaacagtggaggttttccacctagaccaatgaataatccagttcctagcgtgaca
gccattgctgcagccaccgtagcagctgctactgcttggtgggcagcacatgggatgttt
ccattatgtgctccgctacataccggcttctcttttccacctgcttcaacgactgctccc
ttagctaattttggccaaactccaactgctaacgaagaaagggaagagaacagttttcaa
catcctggatcaccagttcaggagcctaaacaggaactctctgaagctttgcagctgcag
cagcaatcagcatccaaatctcctgctacttcttcatctggttctggcaacacttctaat
gcaaaagtggattcagaagtggtagccaacaatgatgaaaacgtccctgctgcaagcgat
gaaaaggacacaagcaaggggaagagcaaaaagcaggtggatcgttcatcttgtggttcc
aacacgccttcgggtagtgatattgagactgatgctttggtaaagaatgatgacggaaaa
gaagaagacaaggaacctgatgtaagtcgtgctgccagtgaatctggtaaccgccgcaat
cgaattcttggcaacttgaatgattcatggaaggaagtctctgagggggggcgcctggca
tttcaagcacttttctcaagagatagattgcctcagagcttttcaccaccacaatttttg
aatggtatgaggcaagaattaaaaggcttcaccgtagaggataataggcaaaatgcagcg
gagagcaatgacacgacacagttggacctcaacagcaacacttgggaatcttgctccaac
gaacaagttgtagagagaaacaacaaatcaaaagaggaaaaccacaaaggactgctgacc
tttagtcatgaccaagggaagccaaagaccaacagaacaggttttaagccttacaagagg
tgtcctgtggaggcgagagagagccgcgtattaaactctagttctccggaacaagaaaaa
tgttcaaagagattgcggcttgaaggggaggcggcttctatttga
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