Amaranthus tricolor (tampala): 130809980
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Entry
130809980 CDS
T09367
Name
(RefSeq) uncharacterized protein LOC130809980
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atri04121
]
130809980
Enzymes [BR:
atri01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130809980
Ubiquitin system [BR:
atri04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130809980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1232
zf-C3HC4
RING_XB3-XBAT31
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4_3
zf-RING_2
zf-C3HC4_2
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
130809980
NCBI-ProteinID:
XP_057531844
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All DBs
Position
4:complement(3717333..3720848)
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AA seq
187 aa
AA seq
DB search
MERDGPPIDDCCTICHESFNIPCQANCSHWFCGRCILEVWEHGSVMQPCKCPLCRRPINL
LIPDDTSQQQQADPQVADIIRNLEVYNRRFGERQSDFIQRLRDLPFLLRRLLRDLMNPQR
SLPFVIKFRVYLAMLLSIIYLLSPVDIIPEAILGVIGLLDDLIVMLVCFLHVAAIYRSVL
VGRHGGL
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atggaaagagatggaccaccaattgatgattgctgtacaatttgccatgaaagcttcaac
attccttgccaagctaattgttctcactggttttgcgggcgttgcattttggaagtatgg
gagcatggatcagtgatgcaaccttgcaaatgtcctttatgtcgccgccccatcaatctg
ttaatacctgatgatacttctcaacagcaacaggctgatccacaagttgctgacatcata
agaaatttggaggtatataatcgtcgatttggtgaacgtcaatctgatttcatccagaga
ctacgagatcttccctttcttctccgaaggctgttgcgtgatttgatgaatcctcaaaga
tctttgccattcgtcattaagtttcgcgtctatttggcaatgctcttgagtatcatatac
ttgttgagtcctgtggacattatccctgaagcaatactaggagtaatcggtcttctggat
gatctgatcgtaatgctcgtttgcttcttacatgtggctgccatctatcgatctgttctt
gttggtcgtcatgggggtttgtga
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