Amaranthus tricolor (tampala): 130809994
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Entry
130809994 CDS
T09367
Name
(RefSeq) uncharacterized protein LOC130809994
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atri04131
]
130809994
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
atri04812
]
130809994
Enzymes [BR:
atri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
130809994
Membrane trafficking [BR:
atri04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
130809994
Cytoskeleton proteins [BR:
atri04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
130809994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_5
NPHP3_N
Vps4_C
AAA_16
AAA_22
Mg_chelatase
TIP49
AAA_14
AAA_2
RNA_helicase
IstB_IS21
nSTAND3
AAA_33
AAA_25
AAA_17
DUF815
MIT
Motif
Other DBs
NCBI-GeneID:
130809994
NCBI-ProteinID:
XP_057531868
LinkDB
All DBs
Position
4:complement(12647659..12661543)
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AA seq
492 aa
AA seq
DB search
MSFWKGIVDSLSTIFSNSDAFYQSNSNGNPNRVGQTMEVGVDGSKVANERTAGKLKGYFD
LAKEEIDKAVRAEEWGLTDDAILHYNNAQRILAEGAATRAPSFVSASEQQKVNSYHQKIS
KWQGQVVERLQILSARLGDNTTEKISSLRPQGAKVTSKRPNFTNNVQQKSPIKTESSLLV
RDQTNKIGASRSNQAIGGYDAKLVEMINTVIVDRSPSVKWDDVAGLDKAKQTLFEMVILP
TKRKDLFTGLRRPPRGLLLFGPPGNGKTMLAKAVASECNATFFNVSASTLTSKWVGEGEK
LVRTLFMVAISRQPSVIFMDEIDSIMSTREANEHDASRRLKSEFLVQFDGVTSNPNDLVI
VIGATNKPQELDDAVVRRLVKRIYIPLPDENVRRLVLKRKLKGQAFSLPGRDLEKLVRET
EGYSGSDLQALCEEAAMMPIRELGSNILTVEADQVRPLRYEDFRSAMTVIRPSLSKSRWE
ELERWNKEFGSN
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgagcttttggaaaggaatagttgattcattgagcacaatattctccaattctgacgcg
ttttatcaatcgaatagtaacggaaaccctaatcgagtggggcaaacaatggaagtgggt
gtagatgggagtaaagttgcgaatgagagaactgctggtaaattgaaaggttactttgat
ttggctaaagaagagattgataaagctgttagagctgaagaatggggtttgactgatgat
gcaattttgcattacaataatgctcaacgtattcttgctgaaggtgctgcgactcgcgcg
ccttccttcgtctctgctagtgaacaacaaaaagttaattcctatcatcagaagatatca
aagtggcagggtcaagttgtcgagagacttcaaatcttgagtgcaagactaggtgacaac
accacggaaaagatttcttctttacgtccacaaggtgccaaagttacatcaaaacgacca
aattttaccaataatgtacaacaaaaatccccaatcaagactgaaagcagtttgttagtt
agagatcaaaccaataagattggagcatctagatccaaccaagctattggtggttatgac
gctaaactagttgagatgataaatacagtaattgtggatagaagtccttctgttaaatgg
gatgatgtagctggtcttgataaggcaaagcaaactttgtttgaaatggttattttgcca
accaaacggaaagacttgtttactggactcaggaggccaccccgaggtttactacttttt
ggtcctccgggtaatgggaaaacaatgcttgctaaagcagttgcatcagagtgtaatgca
acatttttcaatgtttctgcatctacccttacatccaaatgggtgggtgaaggtgaaaaa
cttgtccggaccctcttcatggttgctatttcaaggcagccttctgtaatttttatggat
gagattgatagtatcatgtcaacacgggaggctaacgaacacgatgccagtcgaaggttg
aagtcagagttccttgtccaatttgatggagtcacttccaatcctaatgacctggtgata
gtaattggtgccacaaataaaccacaagaattggatgatgctgttgtgaggagattggtc
aagagaatatacattccattacctgatgagaatgtgaggcggcttgttcttaaacgaaaa
ctgaaaggtcaagcattttctttgcctggtcgggatttagaaaagcttgtgagagaaaca
gagggatactctggaagtgacctgcaagccctgtgcgaagaagctgcgatgatgcctata
agggaacttggttcaaatatactaactgtcgaggctgatcaggtcagacctctgagatat
gaagacttccggagtgcaatgactgtcattagaccgagcttgtctaaaagtcgatgggag
gagcttgaacggtggaacaaagaatttggatccaactaa
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