Amaranthus tricolor (tampala): 130810010
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Entry
130810010 CDS
T09367
Name
(RefSeq) protein PIGMENT DEFECTIVE 338, chloroplastic
KO
K02945
small subunit ribosomal protein S1
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
130810010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
atri03011
]
130810010
Ribosome [BR:
atri03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
130810010
Bacteria
130810010
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
RRP4_S1
PTEN_C2
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
130810010
NCBI-ProteinID:
XP_057531889
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Position
4:complement(28468806..28475294)
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AA seq
512 aa
AA seq
DB search
MLVVMKPFSLLSSTNPSVPFKGFRPPICSSLSRFQLCKNPNRALLRKQNLMFCWNYSIWR
GTHVSFCYAEDISEDLVNNQPPDNSQNVELNDSEELELLDKPLPIAVNGASDTKLENEPK
KLDKDEALEPFLKFFKSKESVEELAEQDEGGREVDTQKMVVEYYEPKTGDFVVGVVVSGN
ENKLDVNVGADMLGTMLTKEILPLYDKEMDYLSCDLDKNVDEFMANGKIGIVHNEDAIKG
KPISGRPVVDAGTVLFAEVLGRTLSGRPLLSTRRFFKRIAWHRVRQIQHLGEPIEVRITE
WNTGGLLTRIEGLRAFLPKAELVDRVNTYTDLKSKVGRRIYVQINRINEENNDLILSERE
AWEKLYLREGALLEGTIKKIYPYGAQVKIGESNRSGLLHASNISRVKFDSISDLLAVGEK
VKVLVIRSLFPDKISLSIAELESEPGLFISDKQKVFAEAEEMAKKYRLKLPRISATHMSE
PPISDLLFEDEASLYANWKWFKFQRENEPDSQ
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgcttgttgttatgaaaccatttagtcttttatcttccactaacccaagtgttcctttt
aagggttttagacctccaatttgctcttcattgagcagatttcagctatgtaaaaaccct
aatagagctttgttaaggaaacagaatttgatgttttgttggaattattcaatttggaga
ggaacccatgtttcattttgctatgctgaggatatctcagaagatttggtgaataaccag
cctcctgataactctcaaaatgtagaattgaatgatagtgaagagttggagttgttggat
aagcccttaccgattgcggtaaacggtgcctctgatacaaagcttgagaatgaacccaag
aaactggataaagatgaagcattggagccttttctaaagttctttaaatcgaaagaatcg
gtggaagaactagctgaacaagatgaggggggacgagaagtagatactcaaaagatggtt
gttgagtattatgagcccaaaactggggattttgttgttggggtagttgtttctggtaat
gaaaataagttagatgtgaatgtaggggcagatatgttgggcacaatgttaacaaaagag
attcttccattgtatgacaaagagatggattacttgtcgtgtgacttagataagaatgtt
gatgaatttatggctaatgggaagattgggattgtccacaatgaggatgcaattaagggg
aaacccatttctggcagacctgttgtggatgctggaactgttttatttgctgaggttctt
ggcagaacacttagtggcaggccgttactttcgacacggcgcttcttcaaacgaatagct
tggcaccgtgtgaggcagatacaacatctcggcgaaccaattgaagttaggattacagag
tggaacacaggcggtttgcttacaagaattgagggtttgcgagccttccttccgaaggcc
gagttggttgacagagtaaacacttatactgatttgaaatccaaggtaggacgtcggata
tatgtgcaaatcaatcgaataaatgaagaaaataatgacttaatactcagtgaacgagaa
gcttgggaaaagctgtacctacgtgagggagcacttttagaaggaactattaagaagatt
tacccttatggtgcccaagtcaagataggagaatcaaataggagtggactgctgcatgca
tcaaatatcagccgtgtcaagtttgattcaattagtgatctattagctgtgggggagaag
gtcaaagttctagttataagatctttgttcccggacaagatctctcttagcattgcggaa
ctggaaagcgagcctggccttttcatatcggacaaacagaaagtatttgccgaggctgaa
gagatggcaaagaaatatagactgaaactcccaaggatttctgcgactcacatgtctgaa
ccgccaattagcgatttgttgtttgaagatgaagcaagtctttatgcaaattggaagtgg
tttaaattccaaagagaaaatgaaccagattcacaataa
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