Amaranthus tricolor (tampala): 130810086
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Entry
130810086 CDS
T09367
Name
(RefSeq) small GTPase LIP1-like isoform X1
KO
K07933
Rab-like protein 3
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
atri04031
]
130810086
GTP-binding proteins [BR:
atri04031
]
Small (monomeric) G-proteins
Unclassified
130810086
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GFIT
Motif
Pfam:
Roc
Ras
Arf
Gtr1_RagA
SRPRB
GTP_EFTU
AAA_16
AAA_22
MMR_HSR1
RsgA_GTPase
PduV-EutP
NACHT
Sigma54_activat
AAA_7
nSTAND1
ABC_tran
Motif
Other DBs
NCBI-GeneID:
130810086
NCBI-ProteinID:
XP_057532008
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Position
4:29296056..29305844
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AA seq
334 aa
AA seq
DB search
MFWRERDRETRDFNGGPPIGQVRVLVLGDSGVGKTSLVQLILNGSVVARPPQTIGCSVSV
KHITFKSSTSSSNDLEGDVERDFFVELWDVCGHERYKDCRSLFYSQVNGIIFVYDVTQKR
TKLNLQKWAAEVAASGTFSAPLASGGPFGLPVPYIVISNKADIAAKESEIGSSGNLVDAA
RQWVEKQGLLSSSEDLPLTASFPGNSALVAAAKEARFDKEAVMKFFHLLIRRRYFADAVP
APSSWSLASQRPRQHSTDILIDDDPLHPSTSRLSGNMYHNIHPPLPAQRNLPPPPTLYPQ
QPVSISENYSFPRIYQNVSSEYTYSKSKRTDIDV
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgttctggagggaaagagatagggagaccagggattttaatggcggaccacctatcggc
caagttcgtgtcctcgttctgggagattctggtgtgggcaagacttcacttgtgcaactc
attttgaacggttctgttgtagcacgtcctccccaaacaattggctgctcggtttcagtt
aagcatattacctttaaaagttctacaagctcatcaaacgacttggagggggatgtagag
agggacttttttgtggagctttgggatgtttgtgggcatgaacgctacaaagactgcaga
tctcttttttattcacaagtaaatggtattatttttgtatatgatgtcacccaaaagaga
actaaattaaaccttcaaaaatgggctgctgaggttgctgcaagtgggacattctcggct
cctctagcctccggtggcccttttgggcttcctgttccctatattgtaatcagcaacaag
gcagatattgcagcaaaggagagtgaaataggcagcagtggtaatcttgttgatgcagct
agacaatgggttgagaagcaaggtctgctatcatcgagtgaggaccttcccctgactgca
agctttcctggaaattcagctcttgttgcggctgcgaaggaggcgagatttgacaaagaa
gctgtgatgaagttttttcatttgctgattaggaggagatattttgctgatgcagtacct
gcaccttcttcttggtctttagcatctcaacgacctagacagcattctactgatatattg
attgatgatgatcctttgcacccatctacgagcaggttgagtggcaatatgtaccacaat
attcatcctccccttccagctcaacgtaatcttccaccccctccgactttgtacccgcag
cagccagtgtcaatttcggaaaactacagcttcccaagaatttatcaaaatgtttcgtca
gagtacacttattccaaatctaagcggactgatattgatgtttga
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