Amaranthus tricolor (tampala): 130810113
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Entry
130810113 CDS
T09367
Name
(RefSeq) polypyrimidine tract-binding protein homolog 3-like isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atri03041
]
130810113
Spliceosome [BR:
atri03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
130810113
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GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
RL
RRM_10
Motif
Other DBs
NCBI-GeneID:
130810113
NCBI-ProteinID:
XP_057532047
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All DBs
Position
4:complement(29588408..29601734)
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AA seq
452 aa
AA seq
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MAEPSKVIHVRNVGHEISENDLLQLFQPFGVVTKLVMLRAKNQALVQMQDVPSAVNVLQC
YTNTQPAIRGRNVYIQFSSHQELTTMDQNAQGRGDEPNRILLVTIHQMIYPITVDVLHQV
FSPHGSVEKIVTFQKSAVSSAYAFSVGFQALIQYESRQSAVTARNLLQGRNIYDGCCQLD
IQFSNLEELQVNYNNERTRDFTNPSLPSEPKGRSPQPGYADGGGLYSFPAGGAPVAFPQM
ANHAAIAAAFGGVFPPGITGTNDRCTVLVSNLNPDRIDEDKLFNLFSLYGNIVRIKLLRN
KPDHALVQMCDGFQAELVVYFLKGIQLFGKRLDVNFSRYPQITSGADTHEYLNSNLNRFN
RNAAKNYRYCCSPTKMIHLSSIPQDITEEEIVSHLEEHGTIVSNKIFETNGKKQALVLFE
NEEQATEALVCKNATTLDGSVIRISFSQSQAI
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaccatctaaggttattcatgtacgtaatgttggacatgaaatttctgagaat
gatttgcttcagctctttcaaccatttggggttgtcacaaaacttgtgatgttgcgtgca
aaaaatcaggctcttgttcaaatgcaagatgttccgtcagccgtcaatgtgctacaatgc
tacaccaatactcaacccgctattaggggaaggaatgtttatattcaattctcatcacat
caagaattaacgacaatggatcaaaatgcacaggggcgaggggatgagcccaatcgaatt
cttttagttacaattcatcaaatgatctatccaataactgtggacgtgctacatcaagtt
ttttctcctcatggatctgtggagaagattgtcacatttcagaagtcagctgtttcttct
gcatatgctttttctgtaggtttccaagcccttatccaatatgaatcacgtcaaagcgcg
gttaccgctcgaaatttgcttcagggacgcaatatctatgacggttgttgccaactggat
atccaattttcaaatcttgaagagttgcaagtgaattataacaatgagcgaacaagggat
ttcacaaatccatccttgccttcagaaccaaaaggcagatctcctcagcctggctatgca
gatggtggtggtttgtattcttttccggcaggtggtgcacctgttgcatttccacagatg
gcaaaccatgcagctattgcggctgcgtttggtggtgttttcccccctggaattacagga
acgaatgacagatgcacagtccttgtttctaatcttaatcctgatagaatagatgaggat
aaacttttcaatttattctctctttatgggaacatagtgaggattaaacttcttcgtaac
aagcctgatcatgcccttgttcaaatgtgtgatggcttccaagcggaattggttgtttat
tttctgaagggaattcaactcttcggcaaaagattagatgttaacttttccagataccct
caaatcacatcaggagccgacacccatgaatatctcaactcgaaccttaaccgattcaac
cgcaatgcagccaagaattaccgctactgctgttctcctactaaaatgattcacttgtcc
tcaattccccaggatatcaccgaggaagagatagtgagtcacttggaggagcacggtact
attgttagcaacaaaatttttgagactaatggcaagaagcaagcccttgttttgttcgag
aatgaggagcaagcaactgaagcccttgtctgcaagaatgctaccacccttgatggttcg
gtcattcgcatctcattctctcagtcacaggcaatctaa
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