Amaranthus tricolor (tampala): 130810193
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Entry
130810193 CDS
T09367
Name
(RefSeq) SWI/SNF complex subunit SWI3B
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
130810193
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atri03021
]
130810193
03036 Chromosome and associated proteins [BR:
atri03036
]
130810193
Transcription machinery [BR:
atri03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
130810193
Chromosome and associated proteins [BR:
atri03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
130810193
PBAF complex
130810193
GBAF(ncBAF) complex
130810193
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
SWIRM-assoc_1
Motif
Other DBs
NCBI-GeneID:
130810193
NCBI-ProteinID:
XP_057532150
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Position
4:complement(32955068..32975893)
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AA seq
487 aa
AA seq
DB search
MTDTSRAMSVDITSHSQVSLPSPQPQQQSTEVPPPLIPTTGSIPPIPNKLDATPQPAPES
PDFVTVPSYSSWFGWDAIHESEVRHMQEFFDGKSSSKNPSIYKYYRDAIINKFRSNPSKK
LNFTEVRRTIVGDVGSIRRVFDFLDTWGLINYSPPSGKPPFKWEDKDKDKDKESSTKTNA
ATPPSTQPDTNARKNTKLCSACKVACTIACFVSDKYDLVLCARCYVRGHYQVGVNSTEFR
RVEISEQVKTDWTDKETLHLLEAVLHYRDDWKHVAEHVGGRTEKECVARFIKLPFQEQFM
ESTYMEEDKNMSSKDQVNAESGMGRPAKTMRLTPLADASNPIMAQAAFLSALAGSEVSEA
AARAAVANLYEMDRVVGRSSAHLRKVQDPTVESSGGFSNLTIEEAHVEAESLLKQEEDEF
LKSVTTIIEVKMKEVLDKIGHHEKLDLQLEKEWRQLDQMKHQLFLDKLTLLLHKAAATKS
TELPPSS
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgacagacacatcaagagcaatgtccgtcgatataacttcccattctcaggtttcactg
ccgtcgccacaaccacaacaacaatctactgaggttccaccacctctcatccccaccacc
ggcagcattccccctatacccaataagcttgatgctactcctcaacccgctcccgaatct
cccgatttcgtcaccgttcctagctactccagttggttcggatgggatgctattcatgag
agcgaggtccggcatatgcaagaattcttcgacgggaaatcgtcatcaaagaaccctagt
atatacaagtactacagagatgctatcatcaacaagttcaggtccaacccttctaagaag
cttaacttcaccgaggtcagacgtactattgttggagatgtgggctccattcgtcgagtc
tttgactttcttgacacttggggcctcatcaattactctccaccctcagggaagcctcca
tttaaatgggaggacaaggataaggataaggataaagaatcatccaccaagaccaatgct
gccactcctccttcaactcaacctgataccaatgctcgcaaaaacaccaagctatgcagt
gcttgcaaggttgcttgcaccattgcctgctttgtttctgataagtatgacctggtgctc
tgtgcaagatgctatgttcgtggccattatcaggttggtgtaaattctacggaattcagg
cgagttgagattagtgaacaagtgaagacagattggactgacaaggaaactttgcatctg
ctagaagctgtactgcattatcgtgatgactggaaacatgtggctgagcatgtgggtggt
agaactgagaaagaatgtgttgctcgtttcatcaagcttccttttcaagagcaatttatg
gaatccacatatatggaagaggacaagaatatgtcaagtaaggaccaagtgaatgctgaa
tccggaatgggccgccctgctaagacgatgcgtcttacaccactcgctgatgcaagcaac
cctattatggctcaggccgcttttttatcagctttggctggttcggaggtttctgaagca
gctgctcgagcagcggtagcaaatttatatgaaatggatcgtgtagttggtagaagcagt
gctcatttgaggaaagtgcaagaccctactgttgaatctagtggcggtttctcaaatctc
acgatagaagaagctcatgtagaggcagagtccctactcaagcaggaagaggatgaattt
ttaaagtcagtaactaccattatcgaagttaagatgaaggaggtgctagataagatcggt
catcatgaaaaattggatttgcaattggaaaaagaatggcgccagttggatcaaatgaag
catcagcttttcttagataaactcactcttttattacacaaggctgctgcaactaaatcg
acagaattgcctccatctagttga
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