Amaranthus tricolor (tampala): 130810221
Help
Entry
130810221 CDS
T09367
Name
(RefSeq) uncharacterized WD repeat-containing protein C17D11.16-like
KO
K14791
periodic tryptophan protein 1
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
atri03009
]
130810221
Ribosome biogenesis [BR:
atri03009
]
Eukaryotic type
90S particles
Other 90S particles
130810221
Pre-60S particles
Other pre-60S particles
130810221
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_EIPR1
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
WD_LRWD1
Beta-prop_WDR19_1st
NBCH_WD40
Beta-prop_SCAP
Beta-prop_DCAF12
WDR54
Beta-prop_Nup120_160
Beta-prop_WDR75_2nd
RuvB_C
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
130810221
NCBI-ProteinID:
XP_057532181
LinkDB
All DBs
Position
4:30885837..30892958
Genome browser
AA seq
475 aa
AA seq
DB search
MIAAISWVPKGVAKSVPEVAELPSKEEIEEMLQSGALDAVDGEDDDGDMDLDTSKEIDEA
LLASAAAQALGKESNDIADAFKELDMDHYDDDDEDGIFSKGLGDAYYPSNELDPYLKDKD
DDDSEEEEDLFIRAEDSVIVCARNDEEISQLEVYILEETEDGPNLYVHHDIIISAFPLST
AWLDCPLKGGEKGNFIAVGSMEPSIEIWDLDIIDEVEPSLVLGGIVEKKKKGKKKSIKYK
DGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVATGTCSITMEHHTDKVQAVAFSHHE
PQVLLSGSFDHTIVMKDGRNPAHSGYRWCVAADVESLAWDPHTKHSFVVSLENGMIQGFD
IRTASSDSDSDLKPIFTLHAHDKAASSISYNTSIPNLLASGSIDKTVKLWDLSNNQPSCV
ASKNPKAGAVFSVSFSEENPLWLAIGGSKGKLEVWDTSSEAGVAKKYTNNNAKKS
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgattgcggcaatttcatgggttccaaagggagttgctaaatcagtacctgaagttgct
gaacttccctctaaagaagaaattgaagagatgcttcaaagcggtgctcttgatgcagta
gatggcgaggatgatgatggagacatggatttggatacttccaaggagattgatgaagct
ctacttgcatcagctgctgcccaggcacttggcaaggaatctaatgatatagcagatgct
tttaaggaacttgacatggaccattatgacgacgatgatgaagatggcattttcagtaaa
gggcttggtgatgcttattatcccagtaatgagttggacccttacttgaaggataaggat
gatgatgattcagaagaagaggaggatttgttcataagagcagaggattcagtaatcgtt
tgtgctcgtaatgatgaagaaatcagtcagcttgaggtttatatcctagaggaaactgaa
gatggtccgaacttgtatgttcaccatgatattattatttcagcattccctttgtccacg
gcatggcttgattgcccattaaagggcggagaaaaaggaaatttcatcgctgttggttca
atggaaccttcaattgaaatatgggatcttgatattattgatgaagtcgaaccatcacta
gtgttaggcggtattgttgagaagaagaaaaaaggaaagaagaaatctatcaagtacaaa
gatggcagtcatactgactctgttcttggccttgcctggaacaaggagttcaggaatata
cttgctagtgccagtgcagacaaacaagtaaagatatgggatgtggctactggaacgtgc
agtattaccatggaacaccacacagacaaggttcaagctgttgcttttagccatcatgaa
ccacaagttcttctaagtggatcttttgatcatacaattgtcatgaaagacggaaggaat
cctgcccactctggatataggtggtgtgttgccgctgatgttgagagcttggcatgggac
ccacatacaaagcactcttttgttgttagtcttgaaaatggtatgatccaaggttttgac
attcgaacagcaagttctgactcagattccgatttgaagcctattttcactcttcatgca
cacgacaaagctgccagctctatctcatataatacttctattcccaacctacttgctagc
ggctctattgataaaacggttaaactatgggatttgtcaaataaccagccttcatgtgtt
gcttctaagaatccaaaagctggagccgtcttttccgtctctttctctgaagaaaaccct
ctttggcttgctattggtggttccaagggaaaattagaagtgtgggatacatcttctgaa
gctggagttgctaagaagtatacgaataataacgctaagaagtcttag
DBGET
integrated database retrieval system
