Amaranthus tricolor (tampala): 130810328
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Entry
130810328 CDS
T09367
Name
(RefSeq) eukaryotic translation initiation factor 4G-like isoform X1
KO
K03260
translation initiation factor 4G
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atri03019
]
130810328
03012 Translation factors [BR:
atri03012
]
130810328
Messenger RNA biogenesis [BR:
atri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
130810328
mRNA cycle factors
Stress granule specific factors
130810328
Translation factors [BR:
atri03012
]
Eukaryotic type
Initiation factors
eIF-4
130810328
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
FANCI_S2
Motif
Other DBs
NCBI-GeneID:
130810328
NCBI-ProteinID:
XP_057532322
LinkDB
All DBs
Position
4:complement(8010547..8027056)
Genome browser
AA seq
1596 aa
AA seq
DB search
MSQNQIKGVKKGKQYRKTGDSGRTNNNTSDQLYRSFSTTGRGGSSAPLSSDSASTDCSFK
KANNAQDRQSRGHHGSVNTTSGPNPASSDVYPVVNCNRVQSTLHASSAPAQAAVESADTS
SKNNNHSVSKVQASSMTPDSTVPLPPPEGGGKAFPLQFGSIIMEVPARTISAPPGLDEQK
RDQEHSAAARAAPANPVPNASKQKEPQKHVHSEPPIAQETHTVSEVNRDVQLISAPSSIR
PMQGHRPALHPMAGMPVPIPYQPYLPPPHLPFCGPNLQIPAHQMPMPRPPHLVNPPQVQQ
RGFLPGLPHHPNQGIIHQGPSFGFNPHLGPPFPHHPGNLAMPMPPPFSLPQPGNGGNARK
TVKITHPETREELRLDKIDGCSPSSRSHQMGPQPFQSVPSYAPMHPSGYFSAPYTPGPPV
FPVPNSFPPTSTQLQLHASSQAFKAQPTMLFMNQSTSNALRHGGSELSNSDLAQSVHIVL
PSVTSPPMTVKAAADITADKGTDSDTSVRSVEEAKADVSSVEPKSDSSSLKESNTSVRSD
KDVVMKENVVKLDSMKDIQQPQNKDVSVAASTATPSVDLGAANAAEKDHDSKHGGGLLQE
TEQNGEKEVGKLPSGHGLKTTYIVKRTAGSEASQGESESVKTGIESDKIAPVNVSKLMLD
NEAAPASVKFPETNLGNEVEIIERSRPASISGVSSVINKTSADPYKIKNNRGKKKRKEML
QKADALGTSSDLYMAYKGPEEKEESGVSGEGATTSNLKCSLHAGVENCSTKKKDELRKLE
LEDWEDAVDGSTPKLESSVRGDNRAKKYSRDFLLTFSEQCTDLPDGFQIMPDIADILSLC
NASGSHNNREYGSSGKKVDRAGAARHDHCVNGMMNADRWDKSGAQVSNRDPGIDLGYGNY
VMGFRPNSSPNYGVRNIQHPGGVLSGPSHSMGFQGTQSNYPETERWKKATGFNKGLMPVP
QSPALMMHRAENKYEVGKVSDEEQAKQRRLKAILNKLTPQNFNKLFAQVKEVNIDNVVTL
SGVISQIFDKALTEPTFCEMYANFCHHLASELPDLSVDDEKITFKRLLLNKCQEEFERNE
REEEEANKADGDIEQTEEEREQKRLNTRRRMLGNIRLIGELYKKRMLTERIMHECIKKLL
GQYQNPDEENIEALCKLMSTIGVMIDHYKAKEHMDAYFDIMGQLSNNMKLSSRVRFMLKD
AIDLRKNKWQQRRKVEGPKKIEEVHRDAAQERLGQAGRFNHGQSLNSAMRRGQSQTVEYI
PKGSMLSSSVGPMGGFRSSSTQVRGYGGKDIRMDDGSSKSRILSVPSPHRSLGDQPITLG
PQGGLAKGMSCRGKPPVSGSNGFNSALERGVRTMEDQFTRQTERFDEPVAHDHSDGLQPD
SMNTIRDVKNPNESIISGKVWPEEHFRDKSVAAIKEFYSANDEKEVALCIKDLNAPKFNP
TVISIWVADAYERKDLERDMLAKLLVNLTKARDDMFSPQQLIKGFELVLENLEDTVIEAP
KAPEYLGRILAKVIIEDVLPLKDVARLIHKGGEQPGRLLEIGLAGDVLGNVLETIKSEKG
ELTLMEIQKSSDLQIDDFRPPNPLKSKKLELFLSRI
NT seq
4791 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaaaatcaaataaagggtgtaaaaaaggggaagcaatacagaaaaacaggggat
agtggaagaacaaataacaatacatctgatcagctttaccggagcttttccaccaccgga
agaggcggttcctcagcccctctatcttctgattctgcttctactgattgcagtttcaag
aaggctaacaatgcacaagacaggcagtcgaggggacatcatggatctgtgaatactaca
tcaggccctaatcctgcttcttctgacgtttatcctgttgtgaattgtaatcgtgtgcag
tcgacattacatgcatcatctgcaccggctcaagctgctgtcgagtcagcagatacttcg
agtaagaacaacaatcactccgtttcaaaagttcaggcgtcctccatgactccagactct
accgtacctttacctcctcctgaaggaggaggtaaggcatttcctcttcaatttggatct
ataatcatggaggttccagcacgaaccatctcggctccaccaggtttggatgagcagaag
cgtgatcaggaacattctgctgctgcaagggctgcacctgctaatccagtaccaaatgct
tctaaacagaaagaacctcaaaagcatgttcattctgaaccaccaattgcccaagaaacc
catacggtttcagaggtcaaccgagatgtgcaactgatatctgcaccgtcttctattcga
ccaatgcaaggtcaccggcctgctcttcatcctatggcagggatgcctgtgcctataccg
tatcagccatacctacctcctccccacttgccattttgtggccccaatctgcaaatcccg
gctcatcaaatgccaatgccgaggccaccacatctagtaaacccacctcaagttcagcaa
cgaggttttttacctggtcttccacaccatcctaatcaaggaattatccatcaaggtcca
agctttggattcaaccctcatctgggaccaccgtttcctcatcacccaggaaatttagca
atgccaatgccacctccatttagtttgccgcagcctggaaacggtggaaatgctcgtaaa
accgtgaagataactcatccggaaacacgcgaggagttgagactagataaaattgatggg
tgttcacctagttcaaggtcacatcagatgggtcctcaaccatttcaatctgtgccgtct
tatgctccaatgcacccaagtggctacttctccgctccctatactccaggtcctccggtt
tttccagttccaaattcttttcctcctacaagcacccagttacaattacatgctagttct
caggctttcaaggcacaaccaactatgcttttcatgaaccaatctacttctaatgcttta
aggcacgggggttcggagttatccaattcagatttggctcagagtgttcatattgtgtta
ccttctgtaacttcaccaccaatgaccgttaaagcagctgcagatattacagcagataag
ggtacagactcagatacatctgttcggtcagttgaggaagcaaaggcagatgtctcttct
gtggaaccaaaatccgattcttctagcttgaaagagtcgaatacatccgttcggtccgat
aaggatgtcgtcatgaaggaaaatgttgtaaagttggactccatgaaggatatacagcag
ccacagaacaaggacgtttctgttgcagcgtcaactgcgactccttcggttgatcttggt
gctgcgaatgctgcagaaaaagatcacgactctaaacatggtggcggacttttgcaagaa
accgagcaaaatggggaaaaggaagttgggaagctgccatcaggtcatggtttgaagacc
acatatattgtcaaaagaactgctggttctgaagcttctcagggagaatctgaatctgtt
aagactggaatcgagagtgacaaaatcgcacctgttaatgtgtcgaaacttatgttggat
aatgaagcagctcccgcttctgttaaatttcctgaaaccaatctagggaacgaagtggag
atcatagagagatcaagaccagcttctatttcaggcgtttcttcggtgataaataaaact
tctgcggacccatataagataaagaataatagggggaagaagaaacggaaagaaatgctt
cagaaagccgatgctcttgggacaagttctgatttgtatatggcctacaaaggtcctgag
gagaaggaagaaagtggtgtttctggagaaggtgctacgacgagtaacttaaagtgttca
ttgcatgctggagttgaaaattgttcgacaaagaaaaaggatgagcttagaaaactagag
cttgaagattgggaagatgctgtagatgggtcgacaccgaagttggagtcctcagttaga
ggggacaatagagctaaaaagtattcaagagattttcttcttactttttcagagcaatgt
accgacttgcctgacgggtttcagattatgcccgacattgctgatatattatctctttgc
aatgctagtggttctcataacaatcgtgaatatggtagttccggaaaaaaagtcgatagg
gctggagctgctcgacatgatcattgtgttaatgggatgatgaatgctgataggtgggat
aaatctggtgcacaagtttctaatcgggatccagggatagatcttggctacggtaattat
gtgatgggatttcggcctaattcaagccccaattatggcgttagaaacattcagcaccct
ggtggggttctttctgggccatcacactcaatggggtttcagggaacacagagtaactac
cctgaaacggaacgctggaaaaaagccacgggtttcaacaaaggtttgatgccggttcct
cagagtccggcactgatgatgcatagagccgagaataagtatgaagtgggtaaggttagt
gatgaagagcaggcaaaacaaaggagattaaaggcgattctaaataagcttactcctcag
aatttcaacaaactgtttgcgcaagttaaagaagttaatatcgacaatgtcgtgactcta
agtggagtcatctctcagatttttgacaaggctcttacagaaccaacattctgtgaaatg
tatgctaacttttgccatcatttggcttcggaattaccagaccttagtgtagatgatgag
aagatcaccttcaagcggctgcttcttaataagtgccaggaggaattcgagaggaatgaa
cgggaagaagaagaagcgaacaaggctgacggggatattgagcaaactgaggaggagaga
gaacaaaagagattgaatacacgaagacgtatgttgggtaacattagattgatcggagag
ttatacaagaagaggatgctaacggagagaataatgcatgaatgcataaagaagttgttg
gggcaatatcaaaatcccgatgaagaaaatatcgaagcattgtgcaagttgatgagcaca
atcggcgtgatgattgatcactacaaagctaaggaacatatggatgcctattttgacatc
atggggcagttatccaataacatgaagctatcttcaagagtgaggttcatgttgaaggat
gccattgatcttaggaagaacaaatggcaacagagaaggaaagttgaagggccgaaaaag
atcgaggaagtgcatagagatgctgctcaagaaaggcttggccaagccggaagatttaat
catgggcagagcttgaactctgcaatgagaaggggtcaaagtcaaactgtagaatatatt
ccaaagggctccatgttatcctcttcagtgggtccgatgggtggcttcagaagttcgagt
actcaggttcgtggatatggcggaaaggatatacgaatggatgatggctcttctaagagc
agaattctttcagtgccttcgccccatcgctctttgggtgatcagccaattacgcttgga
cctcaaggtggtcttgctaagggcatgtcatgtagagggaagccccctgttagtggttcg
aacggtttcaatagcgcgttagagcgtggagtacgtaccatggaagatcaatttacaaga
cagacagaaagatttgatgaaccggtggctcatgatcattccgatggcctacaacccgat
tcaatgaacacaattagggatgtgaaaaaccctaatgaaagcattatctcaggaaaggtg
tggcctgaagaacactttagagacaagtctgtggcagccattaaagaattttacagtgca
aatgatgagaaggaagttgcattgtgcatcaaggatttgaatgctccaaagttcaaccct
acagttatttctatttgggttgctgatgcttatgaaaggaaagacttggagcgggatatg
ttggcaaaattgcttgtcaatctcacaaaggctcgagacgacatgttcagtccacaacag
cttattaaaggcttcgaattggttttggaaaatctggaggatacggttattgaagcccca
aaagcaccagaatatctaggccgaattcttgcaaaagtcatcatagaagacgtcctgccc
ttgaaagacgtggctagattaatacacaaaggcggggagcaacctgggcgtcttttggaa
atcggcttggctggtgatgttcttggaaacgtcttagagacgataaagtcggagaaagga
gaattaaccttgatggagattcaaaaaagctccgatcttcagattgacgatttccgacct
ccaaatcctctcaaatctaaaaaactagagttgtttcttagtagaatctga
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integrated database retrieval system
