Amaranthus tricolor (tampala): 130810351
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Entry
130810351 CDS
T09367
Name
(RefSeq) F-box protein SKP2A
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130810351
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atri04121
]
130810351
Ubiquitin system [BR:
atri04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
130810351
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF7885
LRR_6
LRR_4
LRR_At5g56370
F-box-like
F-box
LRR_Zer-1
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
130810351
NCBI-ProteinID:
XP_057532356
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Position
4:complement(28042726..28047036)
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AA seq
351 aa
AA seq
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MVFSTLDGGIGGGEMATEMTAEWKDIPMELLLRILKLVDDQTVIRASGVCSGWREAICLG
LTHLCLSWCKNDMNQLVLSLVPKFTNLQSLILRQDKPQLEDNAVETVANFCHDLQELDLS
KCFKLTDRSLYALAHGCPNLTKLNISGCSAFTDATLAYLTSFCKKFKSLNLCGCVRAATD
KALQSIAYNCKELQTLNLGWCENVGDLGVTSLAYGCPNLRALDLCGCVLITDESVIALAN
GCPHLRSLGLYYCQNITDRAMYSLAHSRVRNKHGVWQSIKSRYEDDGLRNLNISQCTALT
PPAVQAVCDSFPALHTCPGRHSLIISGCLHLTSVHCACAVQAHRATSTTAH
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atggtattcagtacccttgatggtggtattggtggcggcgagatggctaccgagatgact
gctgaatggaaggatattcctatggagttgctccttcgaattctgaagcttgttgatgat
cagactgtcatcagggcttctggtgtatgtagtggatggagggaagctatttgccttggg
cttactcatctttgcctttcatggtgcaagaacgacatgaaccaattagtcctgtctctt
gtgccgaaattcacaaatttgcagagtttgatacttcgtcaagataaaccacaacttgag
gataatgctgttgagactgtagcgaacttctgtcatgacctacaggagcttgacttgagc
aaatgcttcaagctgactgatcgttctctgtatgccttggctcacggatgtccaaatctt
acgaagctcaacattagtgggtgctcggcttttactgatgctacacttgcgtatttaact
agcttttgcaaaaagtttaagtcgttaaatctttgtgggtgcgttagagctgcaacggac
aaggcattgcagtcgattgcatataactgcaaggagctgcagactctcaatctcggatgg
tgtgaaaatgtcggggatttgggtgtgacaagtcttgcatatggctgcccaaatctgagg
gccctcgacttgtgtggttgtgtacttataacagatgagagcgtgatagcgttggccaat
ggatgccctcaccttcgatcacttggtctctactattgccaaaacataacggatcgagca
atgtattctcttgcccatagtcgtgtcagaaacaagcacggtgtatggcaatcgatcaaa
agcagatacgaagatgacggtctcagaaacctcaacattagtcagtgcactgctctcaca
cctcctgctgtccaggcagtttgtgattcctttccagcccttcacacctgtcctggccga
cactctcttattataagcggctgtctgcatttgacatccgtgcattgtgcctgcgctgtc
caagcacatcgtgctacaagtacaaccgctcattaa
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