KEGG   Amaranthus tricolor (tampala): 130810351
Entry
130810351         CDS       T09367                                 
Name
(RefSeq) F-box protein SKP2A
  KO
K03875  F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
atri  Amaranthus tricolor (tampala)
Pathway
atri04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:atri00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    130810351
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:atri04121]
    130810351
Ubiquitin system [BR:atri04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     130810351
SSDB
Motif
Pfam: DUF7885 LRR_6 LRR_4 LRR_At5g56370 F-box-like F-box LRR_Zer-1 LRR_At1g61320_AtMIF1
Other DBs
NCBI-GeneID: 130810351
NCBI-ProteinID: XP_057532356
LinkDB
Position
4:complement(28042726..28047036)
AA seq 351 aa
MVFSTLDGGIGGGEMATEMTAEWKDIPMELLLRILKLVDDQTVIRASGVCSGWREAICLG
LTHLCLSWCKNDMNQLVLSLVPKFTNLQSLILRQDKPQLEDNAVETVANFCHDLQELDLS
KCFKLTDRSLYALAHGCPNLTKLNISGCSAFTDATLAYLTSFCKKFKSLNLCGCVRAATD
KALQSIAYNCKELQTLNLGWCENVGDLGVTSLAYGCPNLRALDLCGCVLITDESVIALAN
GCPHLRSLGLYYCQNITDRAMYSLAHSRVRNKHGVWQSIKSRYEDDGLRNLNISQCTALT
PPAVQAVCDSFPALHTCPGRHSLIISGCLHLTSVHCACAVQAHRATSTTAH
NT seq 1056 nt   +upstreamnt  +downstreamnt
atggtattcagtacccttgatggtggtattggtggcggcgagatggctaccgagatgact
gctgaatggaaggatattcctatggagttgctccttcgaattctgaagcttgttgatgat
cagactgtcatcagggcttctggtgtatgtagtggatggagggaagctatttgccttggg
cttactcatctttgcctttcatggtgcaagaacgacatgaaccaattagtcctgtctctt
gtgccgaaattcacaaatttgcagagtttgatacttcgtcaagataaaccacaacttgag
gataatgctgttgagactgtagcgaacttctgtcatgacctacaggagcttgacttgagc
aaatgcttcaagctgactgatcgttctctgtatgccttggctcacggatgtccaaatctt
acgaagctcaacattagtgggtgctcggcttttactgatgctacacttgcgtatttaact
agcttttgcaaaaagtttaagtcgttaaatctttgtgggtgcgttagagctgcaacggac
aaggcattgcagtcgattgcatataactgcaaggagctgcagactctcaatctcggatgg
tgtgaaaatgtcggggatttgggtgtgacaagtcttgcatatggctgcccaaatctgagg
gccctcgacttgtgtggttgtgtacttataacagatgagagcgtgatagcgttggccaat
ggatgccctcaccttcgatcacttggtctctactattgccaaaacataacggatcgagca
atgtattctcttgcccatagtcgtgtcagaaacaagcacggtgtatggcaatcgatcaaa
agcagatacgaagatgacggtctcagaaacctcaacattagtcagtgcactgctctcaca
cctcctgctgtccaggcagtttgtgattcctttccagcccttcacacctgtcctggccga
cactctcttattataagcggctgtctgcatttgacatccgtgcattgtgcctgcgctgtc
caagcacatcgtgctacaagtacaaccgctcattaa

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