Amaranthus tricolor (tampala): 130810428
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Entry
130810428 CDS
T09367
Name
(RefSeq) cullin-1
KO
K03347
cullin 1
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri04120
Ubiquitin mediated proteolysis
atri04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130810428
04120 Ubiquitin mediated proteolysis
130810428
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atri04121
]
130810428
Ubiquitin system [BR:
atri04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Cullin
130810428
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
DUF3232
DUF5442
Motif
Other DBs
NCBI-GeneID:
130810428
NCBI-ProteinID:
XP_057532473
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Position
4:complement(1665808..1675948)
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AA seq
738 aa
AA seq
DB search
MDRKVIELEQGWEFMGKGITKLKRILEGLDEPPFNSEDYMMLYTTIYNMCTQKPPHDYSQ
QLYDNYRQAFVDYINSTVLPSLREKHDEFMLRELVKRWSNHKVMVRWLSRFFHYLDRYFI
ARRSLPSLNEVGLTCFRDLVYQEISGKAKDAVIALIDVEREGGQIDRALLKNVLDIYVEI
GMGQMDHYEKDFEAHMLHDTASYYSRKASSWILEDSCPEYMLKSEECLKKEKDRVAHYLH
SSSEPKLLEKVQNELLLVYENQLLEKENSGCRALLKDDKVEDLSRMYRLYSKVTKGLEPI
GSIFKQHITDEGTALVQQAEDAAMSKAENSGGSHEQVFVRKVIELHDKFMTYVTDCFNSH
TIFHKALKEAFEVFLNKGVAGSSSAELLATFCDNILKKGGSEKLSDEAIEDSLEKVVKLL
AYVSDKDLFAEFYRKKLSRRLLFDKSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTL
ARENQTNFEEYLGQNPDASPGLDLTVTVLTTGFWPSYKSSDLNLPAEMVRCVEVFKQFYQ
TKTKHRKLTWVYSLGSCNINGKFGQKTIELVVGTYQAAALMLFNTSDRLSYSEIATQLNL
ADEDLVRVLQSLSCAKYKILLKEPSSRTVSATDYFSFNSSFTDRMRRIRIPLPPMDERKK
VVEDVDKDRRYAIDASIVRIMKSRKVLGYQQLITECVEQLSRMFKPDFKAIKKRIEDLIT
RDYIERDKENPQLFRYLA
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggatcgtaaagtgatcgaactggagcaaggatgggagttcatggggaagggaattaca
aagttgaagaggattctagaaggattagacgagcctccatttaactctgaagactacatg
atgctttacacgacaatatacaacatgtgtactcagaaaccacctcatgattattctcaa
cagctttatgacaattaccgacaggcatttgtggattacattaactcaacggttctacct
tctttacgagaaaaacatgatgagtttatgttgagagaactcgtgaagagatggtcaaat
cataaagtgatggtcaggtggttgtctcgcttctttcattatctggatcggtactttatt
gctcggaggtcgcttccttctcttaatgaagttggattgacttgctttcgtgatttggtt
tatcaagaaatatcaggcaaagcaaaggatgctgttatagctctgattgatgtagaaaga
gagggaggtcaaattgaccgagcattattgaagaatgtactcgatatatatgttgaaatt
ggaatgggacaaatggatcactacgaaaaggacttcgaagcacatatgctgcatgatacc
gcttcttactactcgcgcaaagcctcaagctggatcctagaagactcgtgtccagaatac
atgctgaagtctgaagaatgtttgaagaaagagaaggatagagtggctcattatttacat
tcgagcagtgaaccgaagcttctagagaaggtgcaaaatgagttgctattggtttatgaa
aaccagctattagagaaggagaattctggatgtcgtgctctattgaaagatgacaaggtg
gaagatctttctagaatgtacagactttacagtaaggttaccaaagggttggaacccatt
ggcagtatcttcaaacagcatataactgatgaagggacggccttagtgcagcaggctgaa
gatgctgcaatgagcaaggctgaaaattctggcggctcgcatgagcaggtttttgtcagg
aaagtgattgagttgcatgacaagttcatgacttacgtcactgattgttttaacagccat
acaatctttcacaaggctctcaaggaagcctttgaggtattcttgaataagggtgttgct
ggtagttcaagtgctgaactgttggctacattctgtgataatattctcaagaagggtggt
agtgaaaaattaagcgatgaggctattgaggattcacttgagaaggtggtgaagcttcta
gcatatgtcagtgacaaagatctgtttgctgaattctatagaaagaagctctctcgtcgg
ctactctttgacaagagtgctaatgatgatcatgagagaagtattctaacgaaattgaag
cagcagtgtgggggacagtttacgtcgaagatggaggggatggtgacagacttgacattg
gcgagggaaaaccagactaattttgaagaatatcttggacagaatccagatgctagccct
ggtcttgatttgaccgtgacggttctgacaaccgggttctggccaagttacaaatcttct
gatcttaaccttcctgctgagatggtaaggtgtgttgaagttttcaagcagttttatcaa
actaaaacaaaacataggaagctgacctgggtttactcattgggaagttgtaatattaat
ggaaaatttggtcagaaaacaattgaattggtcgttggaacttaccaggctgctgctttg
atgctttttaatacatcagatcgattgagttattccgaaattgctactcaactaaactta
gctgatgaagacttggtcagagtgcttcaatcattatcttgcgcgaaatataagattctt
ctgaaagagccaagctcaagaaccgtgtccgcaactgattatttttcattcaactctagt
tttacagacagaatgaggaggattaggattcctcttcctccaatggacgaaagaaaaaag
gttgttgaggatgttgacaaagatagaagatatgctattgatgcctctattgtacggatt
atgaaaagtagaaaggttttggggtatcagcaattaatcacagagtgtgtggagcagctt
agccgtatgtttaagcctgatttcaaggcaattaagaagaggatcgaggatttgatcacc
agagattacatcgaaagagacaaggagaacccacaactattccggtacttggcttga
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