Amaranthus tricolor (tampala): 130810527
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Entry
130810527 CDS
T09367
Name
(RefSeq) uncharacterized protein LOC130810527
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
130810527
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
atri03032
]
130810527
03400 DNA repair and recombination proteins [BR:
atri03400
]
130810527
DNA replication proteins [BR:
atri03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
130810527
DNA repair and recombination proteins [BR:
atri03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
130810527
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PTCB-BRCT
BRCT
BRCT_2
LIG3_BRCT
RTT107_BRCT_5
ECT2_BRCT0
TopBP1_BRCT0
Motif
Other DBs
NCBI-GeneID:
130810527
NCBI-ProteinID:
XP_057532611
LinkDB
All DBs
Position
4:complement(28279148..28293270)
Genome browser
AA seq
1025 aa
AA seq
DB search
MNSQLFKGSNVFMSRNLVPPEVFDSLLDALNRNGANVVQCCDPSRNSTEDFHVIGSSNHE
KFEDLRAKGCNLLGPQCVLSCAKQKRALPKLGFVCCLAMDSVKVLTSGFRKEEKEKIEKM
VIAMSGSFLNNASSDVSFVIVKNVMAGKYKWAVSKEKHIVTINWLNQCWVEHRLVPMESY
RVPPFLGLVICVSRISGDERKVMEKLIIQNGGKYSAELTKLCTHLICEIPEGDKFKVANR
WGDIYIVTRKWFDQSIARRVCLNEEAYKVKNCPVSALKNKLKAKSSKEKCSIKSLSVLQS
AATESSLQPGPSRGTTDSDVDVAHSQNISSACRTAEEEEAGQPDLSVQDKNVEECVADDS
EGDGNDLYLSGCRIGLVGFKASDTQKLVGIIRQGGGSRYMSCSERLTHIIVGEPSDVEKR
ELRGLAAHGVIHVVKRNWLEDCYRVRKEVPVMQKHIAFDILLCKDLMGLSSKAPSLDASR
TKHGESSNILSSAPMAPTLQTVSLGTEIPVDRSGADISDVTQNSSHSMKGTKTSSQSNKP
CILFSNPMPPTLPTASSGTEIPVERSGDDILDVTQNSSHSVKGTKTSAQSNKPSVNAKDP
SQKKNQYCDKLQNRMSTEVFIGKHFCFSHSFPDDQRGEVVQWIKEGGGVLIDDHIVMNVD
FTIECHGKIAKPNATMRTTYVSSHWIRSCLEDGRLLDADSHILYSPLPCRVPLPGFEGLR
FCVSQYTDKERSLLRNLCHVLGAVCKEKLTKRITHLLCKYATGNKYEAACKWGIHPVRCE
WLYECVRKCDIVSLSDFHPEEPESGVCITTQNTTQASRLISMENSSQFSSQCQDLRKTNT
FGIDTKGNGHDVPDVPVSVKHCSSQFLNRSQDSKKTFTMQYKRPRLLESMNGSNQDAQVR
KISAVELQDDAKENGPVVPDVAAAIEDLLEHTSMIQDIISPVSTECENSSILVKDHSVSH
SALGPSIHWFSSLGKDPQTPSKDQSIGIHDGFSEPQTESQMVGYEEDLTGRQMIIDRVRT
RSSMF
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgaattcacaactattcaagggttcaaatgtgttcatgtcgagaaatttagttcctcca
gaagttttcgattcacttctcgatgccctaaatcgcaacggtgctaacgtcgtacaatgc
tgcgatccgtctcgcaattctaccgaagattttcatgtcatcggttcctctaaccatgaa
aaattcgaggatttgagagctaagggatgcaatttactaggtccacaatgtgttctttcc
tgtgcaaaacagaagcgagccctccctaagctaggatttgtttgttgtcttgctatggat
agtgtcaaagtgcttacatctggatttagaaaagaggaaaaggaaaaaatagaaaagatg
gtgattgctatgagtggaagctttttaaataacgcttcctcagatgttagctttgttatc
gtaaagaatgtgatggctgggaaatacaagtgggctgtgagtaaagagaagcatatagtt
actattaattggttaaatcagtgttgggttgagcatcgtctcgttccaatggagtcatat
cgtgtccctccattcttagggttggtgatctgtgtctctagaatttctggagatgagcgg
aaggtaatggagaagctaatcatacaaaatggtggaaagtactctgctgaactcactaaa
ctttgcacacatctaatttgtgaaattcctgaaggtgacaaattcaaagttgctaataga
tggggagacatctatattgtaactcgaaaatggtttgatcagtcaattgctagacgagta
tgtctcaatgaggaagcctataaagttaagaactgtccagtttctgcattaaagaataaa
ctaaaagccaagtctagtaaggagaagtgctctattaaatcattatctgtcttgcaatca
gcagccacagagtcatctttgcaaccaggtccatctcgagggactacagattcagatgtt
gatgttgctcattctcagaacatctcttctgcatgtcgaactgctgaagaggaagaagct
ggacagcctgatctatctgttcaggataaaaatgtggaagaatgtgtggctgatgattca
gagggtgatggcaatgatttgtacctttcaggttgcagaattggtctggtaggttttaag
gcttctgacacacagaaactagttggtatcatacgtcagggtgggggctcccgttacatg
tcatgcagtgagagattgacacatattattgttggagagccatcagatgtcgaaaagcga
gagttaagaggcttggctgctcacggggtcatccatgttgttaaacgaaattggcttgaa
gattgttatcgtgtgaggaaagaggtccctgtcatgcagaagcatattgcttttgatata
cttctttgcaaagatttgatgggcttgtctagtaaagcaccaagtctggatgcgagccgc
actaagcatggagaaagctcaaacattctttccagcgctcctatggctccaactttgcaa
actgtgagtttaggtactgagatcccagtagatagaagtggagcggacatctcagatgtc
acccaaaacagcagccactctatgaaaggaacgaagacttcttcacagagtaacaagcct
tgcattcttttcagcaatcctatgcctccaactttgccaactgcgagttcaggtactgag
atcccagtggagagaagtggagatgacatcttagatgtcacccaaaatagcagccattct
gtgaaaggaacaaagacttctgcacagagtaacaagccttctgtaaatgcaaaagaccca
agtcaaaaaaagaatcaatattgtgataaattacaaaataggatgtctacagaggtcttt
attgggaaacatttttgtttctcgcattcttttcctgatgatcaaagaggtgaagttgtt
cagtggataaaggaaggcggaggagtgttaatagatgatcatatcgtaatgaatgtggat
ttcaccattgaatgccatggaaagattgccaaaccaaacgccactatgcgaactacttat
gtatcaagtcactggattcgttcttgcttagaagatggacgcttgcttgatgctgatagt
cacatcctttattcaccacttccttgccgggtacctttgcctggttttgagggcttacga
ttctgtgtatcacagtatacagacaaagagagatcacttttgcgcaatctttgtcatgtt
cttggtgctgtgtgcaaggaaaaacttaccaagaggattacccatcttttatgtaaatat
gccactggcaataagtatgaggctgcctgcaaatggggaattcacccagttagatgtgag
tggctttacgagtgtgtcaggaagtgtgacattgtttcactaagtgacttccatccagaa
gagcccgagtcaggtgtatgcattacgacacaaaatactacacaagcttccagactgatc
tctatggaaaattcatcgcagttctcaagtcagtgccaggacttgagaaagacgaatact
ttcgggattgacaccaaaggaaatggtcatgatgttcctgatgttcctgtctctgtaaag
cattgttcatcgcagttcttaaatcgctcccaggactcgaaaaagacatttactatgcag
tataaaagaccaaggttattggaatcaatgaatggatcaaatcaagatgcgcaagtacgt
aagatctctgcagttgagcttcaggatgatgctaaggaaaatggtcctgttgttcctgat
gtagctgctgctatagaggacttgttggagcatacaagcatgattcaagatataatatca
ccagtcagtacagagtgtgaaaatagttcaatccttgttaaagatcattcagtttctcat
tctgctttagggccttcgatacattggtttagcagtctagggaaggaccctcaaactcca
tctaaagatcagagcataggcattcatgatggttttagtgaaccacagacagaatctcag
atggttggttatgaagaagatctaactggcagacagatgataatagacagagttcgaacc
agaagcagcatgttttga
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