Amaranthus tricolor (tampala): 130810592
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Entry
130810592 CDS
T09367
Name
(RefSeq) E3 ubiquitin-protein ligase ATL6-like
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atri04121
]
130810592
Enzymes [BR:
atri01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130810592
Ubiquitin system [BR:
atri04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
130810592
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-ANAPC11
zf-C3HC4
zf-RING_5
zf-Nse
Prok-RING_1
zf-C3HC4_3
zf-RING_16
Rad50_zn_hook
Rtf2
YacG
Motif
Other DBs
NCBI-GeneID:
130810592
NCBI-ProteinID:
XP_057532691
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All DBs
Position
4:complement(27666222..27669216)
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AA seq
308 aa
AA seq
DB search
MQTKNHLILSSLLILVLLAPSNIVAQDSFKGNTGDVFTPSTIIIIIMGIIFMFTGCLAVF
LRQFSDGCFGLNVAPPNPNLTSDGQIITHGLDPESIKSLPTYLYSDVKQHRKGQVDLNCP
VCLSEFQDEEVLRLLPVCSHVFHPRCIDLWLTKHVTCPICRQSLVPESGVTKPHSIIHVP
PQGDQSQPSDHHEFHQDSDNGEMVDDVKKVIVGKFPRSHSTGHSMGDNSDRFTLVLPEEV
QNRLPDRSKTLSSILSPRNANRCGWFSVTPPIININIRSNSASTSSVVNSSKTLTRGPVK
TTDRLWPI
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacaaaaaaccacttaattctttcctctctactcattctagtcctcctagcacca
tcaaacattgtagcccaagatagcttcaaaggtaacactggagacgtcttcacaccatca
accataatcatcatcatcatgggaataatcttcatgtttacaggctgccttgcggttttc
ctacgccaattctctgatggttgttttggtctcaacgtggccccacctaacccgaaccta
accagtgacgggcaaatcattacccatgggcttgacccggaatccattaaatcccttcct
acatacctttactcagatgttaaacaacacagaaaaggtcaagtcgatctgaactgtccg
gtatgtttaagtgaattccaagacgaagaagtcttacgtttgttgcccgtttgtagtcat
gtatttcatcctcgttgtatcgatctttggcttacgaaacatgtaacatgtcccatttgt
agacaatctttggttcctgaatcaggtgttactaaaccccacagtattatccatgtaccg
cctcaaggagatcaatcacaaccgtctgatcatcatgaatttcatcaagatagtgataat
ggtgaaatggttgatgatgttaagaaggtgattgttggaaagtttcctaggtcgcattca
accggtcattctatgggggataattcagaccggtttacattagtcttaccggaagaggtt
caaaatagattacccgaccggtctaagacgttgtcttctatacttagtcctaggaatgct
aacaggtgtggctggttttctgttactcctcctattattaatattaatatccggtctaat
tcggcatcaaccagttcggtcgtcaatagttcaaagactttgactcgtggaccggttaaa
acgactgatcgtttatggcctatataa
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