Amaranthus tricolor (tampala): 130810627
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Entry
130810627 CDS
T09367
Name
(RefSeq) N-glycosylase/DNA lyase OGG1
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
130810627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atri03400
]
130810627
Enzymes [BR:
atri01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
130810627
DNA repair and recombination proteins [BR:
atri03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
130810627
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
RecR_HhH
HHH
Motif
Other DBs
NCBI-GeneID:
130810627
NCBI-ProteinID:
XP_057532743
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All DBs
Position
4:complement(23978096..23984729)
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AA seq
381 aa
AA seq
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MKRRRPCSSPLSAIKPTSSSTPPTPPISDFTKTKTNIKPAAVSARKSLSEALKIQNLTTQ
NQKWTPLNLCKSELSLPLTLPTGQTFRWKQTGTLQYTGVIKSYLVSLKHLDNGDVAYHFH
AASASNEEDSRLALLDFLNMGICLTDLWEDFSASDQRFAELALHLAGARVLRQDPLECLI
QFLCTSNNNIKRITGMVDYISSLGQFVGIVEGFQFYEFPSLERLAMVSEEELREAGFGYR
AKYIVNTIKALQMKPRGGAQWLSSLRGMDLEDVINSLSTLPGVGPKVASCVALFSLDQHH
AVPVDTHVWQIATREMIPELAGVRLTPKLCNRVAEAFVTRYGKYAGWAQTLLFVSELPSQ
KAIVSSQVCTEIDKNKSVSSL
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgacggcgaccctgttcttctccactgtctgccattaaacccacatcttcctct
acgcccccaactccacccatctctgatttcaccaaaaccaaaacaaacatcaagccagca
gctgtttcagcaagaaaatctctctccgaagccctcaaaatccaaaacttaacaacccag
aatcagaaatggacaccactcaatctgtgcaaatcagagctatctttacccctcacatta
ccgaccggtcagacctttagatggaagcaaacagggactcttcaatacactggcgttatt
aagtcttatctggtgtctttaaaacacctcgataatggtgatgttgcgtaccattttcat
gctgcttcagcttccaacgaggaagattctaggttggcattgcttgattttctcaatatg
ggtatttgtttaactgatttgtgggaggatttttcggcttctgaccagaggtttgctgag
ctagctctccatttggcgggtgctcgtgtgcttagacaggatccgttggaatgccttatt
cagttcttgtgtacatctaataataacattaagagaattactgggatggttgattatatt
tcgtcattaggtcaatttgtgggtatcgttgaggggtttcaattttacgagtttccctca
ttggagcggttggccatggtatcagaagaagagcttagggaagctggctttggctataga
gcaaaatacatcgtcaacacaataaaagccttgcaaatgaaacctagagggggtgctcag
tggctttcatctttgcgtggaatggatttggaagatgtaataaattctctctctactctg
cccggtgtgggtccaaaggtggcatcttgtgtagctctcttctctctggatcaacatcat
gcagttcctgttgacactcatgtttggcagattgctacgagggagatgatacctgagctt
gcaggtgttcgtctgacaccgaagttatgcaatcgtgtagccgaagcttttgtaactaga
tatgggaagtatgctggctgggctcaaacccttctatttgtctctgaattgccgtctcaa
aaggccatcgtatcatcgcaagtttgcactgagattgacaagaataagtcagtttcaagt
ctctga
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