Amaranthus tricolor (tampala): 130810992
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Entry
130810992 CDS
T09367
Name
(RefSeq) RAN GTPase-activating protein 2-like
KO
K14319
Ran GTPase-activating protein 1
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130810992
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atri03019
]
130810992
Messenger RNA biogenesis [BR:
atri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
130810992
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WPP
LRR_6
LRR_4
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
130810992
NCBI-ProteinID:
XP_057533096
LinkDB
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Position
4:complement(4403340..4406471)
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AA seq
536 aa
AA seq
DB search
MDAMQTNAERRPFSIKLWPPSQNTRIMLVERMTSNLSTTTIFTQKYGSLSKEEAEENAKE
IEEVAFTAASQFFEKEPDGDGSSAVQLYAKECSKLILEALKRGPASKDVKKLPTSVVAQE
CFFDISKGSRAFIEAAEAEELLAPLKDPSNNYTKICFSNRSFGLGAARVAEPILASIKDK
LKDVDLSDFIAGRAEAEALDVMNIFSAALEGSVLKSLDLSNNALGEKGVRAFGALLQSQR
SLEELYLMNDGISEEAARAVCELVPSTEKLRVLQFHNNMTGDEGAIAISEVVKRSPMLED
FRCSSTRVGSDGGVALSEALEGCVNLTKLDLRDNMFGVEAGVALSKALLNFGNLVEAYLS
YLNLEDEGTTAIANALKDSAPLLQVLELAGNDVTAAAAPALSACLASKKHLLKLNLAENE
LKDEGAIEISKALESYTQLQELDMNTNAIRRAGARVLASVVVDKPNFQLLNINGNFISDD
GIDDVQAAFKKCPNKLGSLDENDPEGRDDEKDSEDEGAGDDNDLESKMNNLDVDDD
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggatgctatgcaaacaaatgctgagcgccgtcctttttcgattaaattatggcctcca
agccagaacacaaggatcatgcttgttgagaggatgaccagcaatctttcaacaaccaca
attttcacgcaaaagtatggtagtttgagcaaggaagaggctgaggagaatgccaaggaa
atcgaagaggtggcgtttactgctgcaagtcaattctttgaaaaggagcctgatggtgat
ggaagctctgcagtccagctttatgctaaggaatgtagtaaacttatacttgaagcccta
aaaagaggtcctgcaagcaaggatgttaaaaaactgccaacttctgtggtggcccaggaa
tgtttttttgatatatcaaaaggttcacgtgcattcattgaggcagcagaagcagaagag
cttttggcaccgctgaaggatccatcgaacaattacaccaagatatgctttagtaacaga
agttttgggttgggcgcagctcgtgttgcagagcctatcttggcttcgattaaggataaa
ttaaaggatgtggatttgtctgattttattgctggtagagcagaggcagaagcgcttgat
gtgatgaatatcttctcagctgcccttgaaggttctgttttaaagtctcttgatctttca
aacaatgccttgggtgagaagggtgtccgagcatttggagcactcttgcaatcacagcgt
agcttggaggagctttatttaatgaatgatggaatttcagaggaggctgcacgtgccgtt
tgtgagttggttccttccacagagaagcttagggttcttcagtttcacaataacatgaca
ggagatgaaggtgctatcgccatatctgaggttgtgaagcgttctcctatgctggaggat
tttaggtgttcctcaacaagggtaggttctgatggaggtgttgccttgtctgaagccctt
gagggatgtgttaatttgacaaagcttgacttgcgtgataacatgtttggcgtagaagcc
ggagttgctttgagcaaagctcttttgaattttggaaatcttgttgaagcttacctgagt
tacttgaacttggaagatgaggggaccactgccatagcaaacgctctcaaggattcggct
cctttgcttcaagtgttagagttggctggtaatgatgttacagctgctgctgcacctgct
ctgtctgcctgtctagcatcaaagaagcacctattgaagctaaacttggctgaaaatgag
ctcaaggatgaaggggctatagagattagtaaggctctcgaaagttatactcaattacag
gaactcgacatgaatacaaatgccataagaagggctggagctagggttttggctagtgtg
gtggtggataaacctaattttcaattgctgaacattaatggaaatttcatatccgacgac
ggaatcgacgatgttcaagcagctttcaaaaagtgccccaacaagctagggtcattagac
gagaatgacccagaaggtagagatgatgaaaaggattctgaagatgagggtgctggcgat
gacaatgatctggaatccaaaatgaacaacctcgatgtcgatgacgattag
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