KEGG   Amaranthus tricolor (tampala): 130811078
Entry
130811078         CDS       T09367                                 
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
atri  Amaranthus tricolor (tampala)
Pathway
atri03030  DNA replication
atri03410  Base excision repair
atri03420  Nucleotide excision repair
atri03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:atri00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    130811078
   03410 Base excision repair
    130811078
   03420 Nucleotide excision repair
    130811078
   03430 Mismatch repair
    130811078
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:atri03032]
    130811078
   03036 Chromosome and associated proteins [BR:atri03036]
    130811078
   03400 DNA repair and recombination proteins [BR:atri03400]
    130811078
DNA replication proteins [BR:atri03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    130811078
  DNA Replication Termination Factors
   ELG1-RFC complex
    130811078
Chromosome and associated proteins [BR:atri03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    130811078
DNA repair and recombination proteins [BR:atri03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     130811078
  Check point factors
   HRAD17(Rad24)-RFC complex
    130811078
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 AAA_22 RCF1-5-like_lid AAA_16 AAA_11 AAA_assoc_2 ATPase_2 AAA_14 AAA_5 DUF815 AAA_30 AAA_24 RuvB_N DNAX_ATPase_lid NB-ARC AAA_7 bpMoxR ResIII AAA_19 AAA_3 nSTAND3 SLFN-g3_helicase MCM Mg_chelatase TIP49 DUF3086 AAA_2 TniB AAA_18 AAA_28 ABC_tran FtsK_SpoIIIE RNA_helicase AAA_25
Other DBs
NCBI-GeneID: 130811078
NCBI-ProteinID: XP_057533219
LinkDB
Position
4:24935783..24941834
AA seq 363 aa
MAETISLMDVDEADNDTIPKPTMKSNKGKNVVVSGDGKSTLWVEKYRPQSLADVAAHRDI
IDTIDRLTNENKLPHLLLYGPPGTGKTSTILAVARKLYGNQFHNMILELNASDERGIDVV
RQQIQDFASTQSFSFGTKAHVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNNV
NKVISALQSRCTRFRFAPLDSIHVTERLKHVIEAEGLDVTESGLAALVRLSTGDMRKALN
ILQSTHMASQQITEEAVYLCTGNPLPKDIELISHWLLNETFVNSFNRISEMKTRKGLALV
DIIREVTMFVFRIRMPADVRVQLINDMADIEYRLSFGCSDKLQLGSLIASFTKARSALVA
AAK
NT seq 1092 nt   +upstreamnt  +downstreamnt
atggcggaaactatatcgctcatggatgtcgacgaagctgacaacgacactattccaaaa
ccaactatgaaatcaaacaaaggtaaaaacgtcgtcgtttccggcgatggaaaatcaact
ctttgggttgaaaaataccgtccacaatctcttgccgacgttgctgctcaccgtgacatc
attgataccattgataggttaacaaacgagaataaattgccgcatcttctgctttatgga
cctccaggaacaggaaaaacgtccacaattttggcggttgctaggaaactttatgggaat
cagtttcataatatgattcttgagcttaatgcttctgatgaacgtggtattgacgttgtt
cgtcagcaaattcaggactttgctagcactcagagtttctcctttgggacaaaggcacat
gtaaaattagttttgctggatgaagctgatgcaatgacaaaggatgcacagtttgctttg
cgccgagtgattgagaaatacacaaaaagtacaagatttgcacttatttgtaacaacgtt
aacaaggtcatttcagcactccagtcgagatgtacacgcttccggtttgctcctcttgat
tctattcatgtcactgagaggcttaaacatgttattgaagctgaagggcttgatgtgaca
gagtctggcttagctgcacttgtgcggttgagtactggagacatgagaaaggcactgaat
atattgcagtcaacacacatggcatctcagcaaattacagaagaagcagtctacctgtgc
actggaaatcctcttccgaaggatattgagctaatatcacattggctacttaatgagact
tttgttaatagtttcaaccgaatttctgaaatgaagaccagaaaaggattggccttggtg
gacatcattagggaagtaacgatgtttgtttttagaatcaggatgccagcagatgttcga
gttcaattgattaatgatatggctgatatagagtatagactaagtttcggatgtagtgat
aaactacagcttgggtctctcattgcttctttcacaaaggctcgttctgcattggttgcg
gctgcaaaatag

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