Amaranthus tricolor (tampala): 130811116
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Entry
130811116 CDS
T09367
Name
(RefSeq) uncharacterized protein LOC130811116
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
atri03016
]
130811116
Enzymes [BR:
atri01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
130811116
Transfer RNA biogenesis [BR:
atri03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
130811116
Prokaryotic type
130811116
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
130811116
NCBI-ProteinID:
XP_057533273
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All DBs
Position
4:complement(24145282..24147503)
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AA seq
577 aa
AA seq
DB search
MESENPSDAISSPTPTPPPPQPPLLPPPPFEQPPLKKPKMSSTTNTSSDETTPKPPRYKR
RKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALFVSGAVPEADRGQLQRCEWARSARTD
KGVSAVGQVVSGRFYVDPPGFIQRLNSNLNPRIRIFGYKRVTPTFNAKKFCDRRRYVYLL
PVFALDPSSHRDRESVLASLGSENELIKCVGCSERGRKVFGVMGNRKCGNLSSSVHSDIS
SNSLSAMVKDSENEVEDKGEHGSLKEGLTNNAGVDHEVLVQSDTSPTNGDASLICEDKEK
NDKEEYKNGSQQEPLKLDATMVDSDVLSDPERSLKTEQISEFKYGEEERTRFNRILNYYV
GTHNFHNFTTRTKAEDPSAKRYIVSFEANTTLTLEGIEFVKCEVIGQSFMLHQIRKMIGM
AVAVMRDFVPESIYDRAFDQDYHINVPTAPEVGLYLDECLFTSYNNKWKDSHEEISMKDY
AEEAEEFKLKYIYTHIAKTEHKEGSVAVWLHSLNHRNYPDFRPPNDRVEGAANAEGENAD
IKQDVATDEGEMAVNRVELAATDDGEKAVNDEVKCGR
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggaatctgaaaacccatctgatgccatctcctccccgaccccgaccccgcccccaccc
caacctccactcctaccgccaccaccttttgaacagcccccattaaagaaacccaaaatg
tcatcaactaccaatacctcctccgacgaaacaaccccaaaacccccccgttacaaacgt
cgaaaaattgcaatcttcttcgcctactgcggcgttggttaccaaggaatgcaaaagaat
ccaggtgcaaaaaccatcgaaggagatcttgaagaagccctctttgtctctggtgcagtt
cctgaagctgatcgcggccaactccaacgctgcgagtgggctcgttctgctcgtacagat
aaaggtgttagtgcagttggtcaggttgtttctggtcgattttatgtagacccacctggg
tttattcaacgtttgaactctaatcttaatccccgaatcaggatctttgggtataaaagg
gtcacaccaacgtttaatgctaaaaagttttgtgacaggaggagatatgtttatttgctg
cctgtttttgcgcttgatcctagcagtcatcgtgatagggagagtgttttagctagttta
gggtctgagaacgagcttatcaagtgtgtggggtgttctgagagagggaggaaggttttt
ggtgtaatgggcaataggaaatgtgggaatctgagtagttctgttcattcagacatttcg
tcgaacagtttgagtgcaatggtaaaagatagtgaaaatgaggtggaagataaaggagaa
catggtagtttaaaggagggtttgacaaataatgcaggtgttgatcatgaggtgctcgtt
cagtcagacacttctccaaccaatggagatgcatctttgatttgtgaggataaagagaag
aatgataaagaagagtataaaaatggttctcagcaagaacccttgaagcttgatgctact
atggtggattctgatgttttgagtgatccagaaaggtcattaaaaaccgagcagattagt
gaattcaagtatggggaagaggaaagaactaggtttaatagaatcctcaattattatgta
ggaacccataattttcataactttacaacccgaacaaaggctgaagatccctcagcaaaa
cgatacattgtatcgttcgaagccaacaccacgcttactctcgaagggatagagttcgtg
aaatgcgaggttatagggcaaagctttatgcttcatcaaattcggaaaatgataggaatg
gcggtggcagtgatgagggatttcgttcctgaatcaatctatgaccgagcattcgatcag
gactatcacattaatgtgcccacagctccagaagtaggtttatacttggatgaatgttta
ttcacctcgtataacaataaatggaaagattcgcacgaggagatatcgatgaaagattac
gcggaagaagctgaggaattcaaactgaagtatatatatactcatatagccaaaaccgaa
cataaggaagggtctgttgctgtttggctacattccctaaatcatcgtaattatcctgat
tttcgccctcctaatgatcgagtggagggtgcggcgaatgctgaaggggaaaacgcggat
atcaaacaggatgtagcgactgatgaaggggagatggcggttaatagagtcgagttggct
gctaccgatgatggggaaaaggcggtaaatgatgaagtgaaatgtgggagatga
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