Amaranthus tricolor (tampala): 130811148
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Entry
130811148 CDS
T09367
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
130811148
Enzymes [BR:
atri01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
130811148
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
Motif
Other DBs
NCBI-GeneID:
130811148
NCBI-ProteinID:
XP_057533314
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Position
4:23713286..23719936
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AA seq
674 aa
AA seq
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MTKGRLWMCGGCCGNGEVEPGPGPTPTPTPGPGPAPDVPTDQPVKLQILDRYVVLDNGIV
RVTLSNPQGIVTGIAYNGIDNLLEVRNVEDNRGYWDLVWNDDTTPGTFDMIKTTKFQVIV
QNDDQVEVSFSRQWDPSLKGKLVPLNIDKRFIMLRGSSGFYTYAIYERMNDWPGFSMGET
RITFKLNKQWFHYMALADNRQRFMPLPDDRMPGRCQTLGYPEAVLLTNPIEPNLKGEVDD
KYQYSCDNKDILVHGWISTDQATGFWQITPSFEYRSGGPVKQNLTSHVGPTSLSVFYSGH
YAGDPLVPKFADGEAWKRVFGPVFIYCNSCPKDVDFHLLWEDARQQFVVEADNWPYSFPA
SEDFPKPQQRGTVGGRLLVRDRYVSDDLIPAGGAYVGLAVPGAPGSWQTEIKGYQFWTTA
DDNGYFSIKGIREGDYNLYGWVPGVVADYKCDALITITAGCDTQMGELVYEPPRDGPTLW
EIGIPDRSAAEFYAPDPNPNFVNQLYVNHPDRFRQYGLWERYSELYPKEDLVYTIGVSDF
QKDWFYAQVTRKTENGYTGTTWQIKFKLDKVDGKGIYKLRLAIASATLAEVQVRLNNPNA
NRPIFTTGLIGRDNSIARHGIHGLYWFYSVDIPGSNLVHGDNTLFLTQPRNQSPFQGIMY
DYLRLEGPPTSAAI
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaagggagactatggatgtgcggtggatgctgtggaaatggagaagttgaaccg
ggtccgggtccgactccgactccgactccgggtcccggcccggcccctgatgtacctacg
gatcaacctgtaaaacttcaaatcctcgatcgttatgttgtactggacaatggcattgtt
cgagtcacattgtcaaatcctcaaggaatcgttactggaattgcttataatggcatcgac
aatttgcttgaagttcgaaatgtagaagataatagagggtattgggaccttgtttggaat
gatgatactacgccagggacatttgacatgataaaaacaacaaaatttcaggtcattgtg
caaaatgatgatcaggttgaagtttctttcagtagacaatgggatccctcactcaagggc
aagcttgttcctttgaatattgataaaaggttcattatgttgcgtggctcatccggtttc
tacacatatgcaatttatgagcggatgaatgattggcctggctttagtatgggtgagact
aggatcacctttaagctcaacaagcaatggtttcactacatggcccttgcagataacagg
caacggtttatgcctttgcctgatgatagaatgcccggaagatgtcaaacacttggctac
cccgaagctgtcttgcttacgaatcctatagaaccgaacctcaagggagaggttgatgac
aaatatcaatattcatgtgataacaaagacattttagtccatggttggattagcactgat
caagctacagggttttggcaaattacacctagcttcgagtatcgttctggtggaccagtc
aaacaaaacttgacgtcccacgtgggccctacatcgttatctgtgttttacagcggccat
tatgctggggatcctctagtaccaaaatttgccgatggggaggcatggaaaagggtgttt
ggcccggtttttatatactgcaattcctgtccaaaggatgttgattttcatctgctttgg
gaagatgctagacaacagtttgtagttgaggctgataattggccatacagtttcccagca
tcagaagattttcccaaacctcagcagcgtggtactgtcggtggcagactactagttcga
gacagatatgttagtgacgatcttataccagccggtggagcatatgttgggttagcggta
cctggagcacctggatcatggcaaaccgaaatcaagggttatcagttttggactacagct
gatgataacggctatttttcaatcaaaggcatacgagaaggagattataatctttacggt
tgggttcctggagtcgttgcagactacaaatgtgatgctctcattaccataacagctgga
tgtgatacacaaatgggtgaattggtatatgagcctcctagagatggaccaaccttgtgg
gaaatcggaattcctgatcgttctgcagcagaattctatgctcctgatcctaatcctaat
tttgtcaatcaattatatgtcaatcatcctgacaggtttcggcaatatggattgtgggag
agatactcagaattataccctaaagaagatttagtttacacaattggtgttagtgatttt
caaaaggattggttctatgctcaagttactaggaaaacagaaaatgggtatacaggaaca
acatggcaaatcaaattcaaactggataaggtagacggaaagggcatctacaagctgagg
ttggctattgcttctgcaactcttgctgaagttcaggtacggttaaacaatccaaatgca
aatcgacccatttttacaaccggattaatagggagggataactcgatagcaaggcacggc
attcatggcttatactggttctatagtgtagacataccgggctctaatcttgtacatgga
gataatactctgttcctgacacaacctcggaaccaaagtcccttccaggggataatgtat
gattatttaagacttgaaggtcctcctactagtgctgccatataa
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